RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 GKAP1Q5VSY0 366 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF449Q6P9G9 518 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 RNF10Q8N5U6 811 aaKnown RBP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 CLSTN2Q9H4D0 955 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 TYW1Q9NV66 732 aaKnown RBP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ASAP1Q9ULH1 1129 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 C2CD2Q9Y426 696 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 MAP3K5Q99683 1374 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 PLB1Q6P1J6 1458 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 EPRSP07814 1512 aaKnown RBP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 SNX2O60749 519 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 ARHGAP25P42331 645 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 ZSCAN25Q6NSZ9 544 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 NEPROQ6NW34 567 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 RASGRP2Q7LDG7 609 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 APLFQ8IW19 511 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 NELL1Q92832 810 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 JAKMIP1Q96N16 626 aaKnown RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 UQCC2Q9BRT2 126 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 CNNM2Q9H8M5 875 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 PARVGQ9HBI0 331 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 INIPQ9NRY2 104 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF180Q9UJW8 692 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 FBXL5Q9UKA1 691 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 DAAM1Q9Y4D1 1078 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 KIF7Q2M1P5 1343 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 LRPPRCP42704 1394 aaKnown RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 LRRIQ3A6PVS8 624 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 TSPAN1O60635 241 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 FBXO21O94952 628 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 PCP11498 1178 aaKnown RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 SKIV2L2P42285 1042 aaKnown RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 CENPAP49450 140 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 PTPROQ16827 1216 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 ACCSLQ4AC99 568 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 C7orf57Q8NEG2 295 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC110Q8TBZ0 833 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 FAM71BQ8TC56 605 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 DDX27Q96GQ7 796 aaKnown RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 TCF12Q99081 682 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 PUS3Q9BZE2 481 aaKnown RBP8.6□□□□□ -1.03
GPNMB-201ENST00000258733 DRC3Q9H069 523 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 SEMA4AQ9H3S1 761 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 GPR108Q9NPR9 543 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 TCF7L2Q9NQB0 619 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 MTUS1Q9ULD2 1270 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 MKL2Q9ULH7 1088 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 KIAA0556O60303 1618 aa8.6□□□□□ -1.03
GPNMB-201ENST00000258733 RASA4BC9J798 803 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 AP5Z1O43299 807 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 MGRN1O60291 552 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 DIAPH2O60879 1101 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 CLTAP09496 248 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 ALDH3A1P30838 453 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 KLC1Q07866 573 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 MSLNQ13421 630 aaPredicted RBP8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
GPNMB-201ENST00000258733 LURAP1LQ8IV03 231 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 LRRC43Q8N309 656 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 TONSLQ96HA7 1378 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 NAP1L4Q99733 375 aaKnown RBP8.59□□□□□ -1.03
GPNMB-201ENST00000258733 GLT8D2Q9H1C3 349 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 SLC40A1Q9NP59 571 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 ITSN2Q9NZM3 1697 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PTPRMP28827 1452 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 KIF15Q9NS87 1388 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 C2orf81A6NN90 581 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 ABLIM1O14639 778 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PAHP00439 452 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 MYBL1P10243 752 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PCNAP12004 261 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 MAN1A1P33908 653 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 SIM2Q14190 667 aaPredicted RBP8.59□□□□□ -1.03
GPNMB-201ENST00000258733 TAF11Q15544 211 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PDXDC1Q6P996 788 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 TMC4Q7Z404 712 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 SNX32Q86XE0 403 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 SIX5Q8N196 739 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 TRIML2Q8N7C3 387 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 NAF1Q96HR8 494 aaKnown RBP8.59□□□□□ -1.03
GPNMB-201ENST00000258733 RPGRIP1Q96KN7 1286 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 EBF2Q9HAK2 575 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PIDD1Q9HB75 910 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 SUCLA2Q9P2R7 463 aaPredicted RBP8.59□□□□□ -1.03
GPNMB-201ENST00000258733 CIDEBQ9UHD4 219 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 ABCC11Q96J66 1382 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC7Q96M83 1385 aa8.59□□□□□ -1.03
GPNMB-201ENST00000258733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms