RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 DDAH1O94760 285 aa11.29□□□□□ -0.6
SEMA6A-201ENST00000257414 ERCC3P19447 782 aa11.29□□□□□ -0.6
SEMA6A-201ENST00000257414 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
SEMA6A-201ENST00000257414 MAATS1Q7Z4T9 603 aa11.29□□□□□ -0.6
SEMA6A-201ENST00000257414 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
SEMA6A-201ENST00000257414 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 OPA1O60313 960 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 TNNI2P48788 182 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 NCAPHQ15003 741 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 TSGA10Q9BZW7 698 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 SAP30BPQ9UHR5 308 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 PRPF3O43395 683 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 GYS2P54840 703 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 HNRNPH2P55795 449 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 KRT31Q15323 416 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 INF2Q27J81 1249 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 SV2BQ7L1I2 683 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 CABP7Q86V35 215 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 MEGF6O75095 1541 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 RDXP35241 583 aaKnown RBP11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 USP8P40818 1118 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 DNM2P50570 870 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 PTPAQ15257 358 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 CNNM4Q6P4Q7 775 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 USP49Q70CQ1 688 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 VPS36Q86VN1 386 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 RASGRP4Q8TDF6 673 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 TCEAL9Q9UHQ7 104 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 MRFAP1Q9Y605 127 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
SEMA6A-201ENST00000257414 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.6
SEMA6A-201ENST00000257414 PPP1R2P41236 205 aa11.27□□□□□ -0.6
SEMA6A-201ENST00000257414 TXKP42681 527 aa11.27□□□□□ -0.6
SEMA6A-201ENST00000257414 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.6
SEMA6A-201ENST00000257414 SPAG5Q96R06 1193 aa11.27□□□□□ -0.6
SEMA6A-201ENST00000257414 ANKRD2Q9GZV1 360 aa11.27□□□□□ -0.6
SEMA6A-201ENST00000257414 LONP1P36776 959 aaKnown RBP11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 GRIN1Q05586 938 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 CCDC24Q8N4L8 307 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 CSF1RP07333 972 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 ZNF76P36508 570 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 VAV2P52735 878 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 NONOQ15233 471 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 TC2NQ8N9U0 490 aa11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 FAM207AQ9NSI2 230 aaPredicted RBP11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
SEMA6A-201ENST00000257414 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 EBAG9O00559 213 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 TRAPPC10P48553 1259 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 RNF187Q5TA31 235 aaPredicted RBP11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 SUSD4Q5VX71 490 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 IFT81Q8WYA0 676 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 PLA2G12BQ9BX93 195 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 ARPP21Q9UBL0 812 aaPredicted RBP11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 RWDD2AQ9UIY3 292 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 HPSEQ9Y251 543 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 FAN1Q9Y2M0 1017 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 MAGEA1P43355 309 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 ZNF658Q5TYW1 1059 aaPredicted RBP11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 SLF2Q8IX21 1173 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 TNS3Q68CZ2 1445 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 GOLGA6BA6NDN3 693 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 DYMQ7RTS9 669 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 C2CD5Q86YS7 1000 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 RPGRIP1Q96KN7 1286 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 IFIH1Q9BYX4 1025 aaKnown RBP11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 ABCB6Q9NP58 842 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 GDAQ9Y2T3 454 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 GOLGA6CA6NDK9 693 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 B4DLN1 442 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 GOLGA6DP0CG33 693 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 NCAPH2Q6IBW4 605 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 TPTE2Q6XPS3 522 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 GOLGA6AQ9NYA3 693 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 ARHGAP23Q9P227 1491 aa11.26□□□□□ -0.61
SEMA6A-201ENST00000257414 TRAF5O00463 557 aa11.25□□□□□ -0.61
SEMA6A-201ENST00000257414 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
SEMA6A-201ENST00000257414 C8orf74Q6P047 294 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms