RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 STK24Q9Y6E0 443 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 RAD50Q92878 1312 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 TSPY2A6NKD2 308 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 RAD21O60216 631 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 RANBP6O60518 1105 aaKnown RBP10.1□□□□□ -0.79
TMEM258-201ENST00000257262 PEX10O60683 326 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 FMNL1O95466 1100 aaPredicted RBP10.1□□□□□ -0.79
TMEM258-201ENST00000257262 PSMC4P43686 418 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 GCLCP48506 637 aaPredicted RBP10.1□□□□□ -0.79
TMEM258-201ENST00000257262 ARHGEF6Q15052 776 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 BMP2KLQ5H9B9 411 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
TMEM258-201ENST00000257262 FBXO46Q6PJ61 603 aaPredicted RBP10.1□□□□□ -0.79
TMEM258-201ENST00000257262 POTEEQ6S8J3 1075 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 SPICE1Q8N0Z3 855 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 MKL1Q969V6 931 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 CEP95Q96GE4 821 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 TOMM22Q9NS69 142 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 MTMR4Q9NYA4 1195 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 PTPN22Q9Y2R2 807 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
TMEM258-201ENST00000257262 F5H6K3 240 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 SGSM2O43147 1006 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 ORC4O43929 436 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 NMT2O60551 498 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 PTH1RQ03431 593 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 KLRC3Q07444 240 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 COG2Q14746 738 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 FAM110CQ1W6H9 321 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 Q3C1V9 767 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 AKNAD1Q5T1N1 836 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 MFSD6Q6ZSS7 791 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 LPAR1Q92633 364 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 TRIM47Q96LD4 638 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 TANGO6Q9C0B7 1094 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 TXNRD2Q9NNW7 524 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 IL17RBQ9NRM6 502 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 MORF4L1Q9UBU8 362 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 CTNNA3Q9UI47 895 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 HPS5Q9UPZ3 1129 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 PARP14Q460N5 1801 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 RLFQ13129 1914 aa10.09□□□□□ -0.79
TMEM258-201ENST00000257262 WDR46O15213 610 aaKnown RBP10.08□□□□□ -0.8
TMEM258-201ENST00000257262 TTLL1O95922 423 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 GNRH1P01148 92 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 FCGRTP55899 365 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 IMMTQ16891 758 aaKnown RBP10.08□□□□□ -0.8
TMEM258-201ENST00000257262 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 GPRC5AQ8NFJ5 357 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 STAG1Q8WVM7 1258 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 HOXC10Q9NYD6 342 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 STX8Q9UNK0 236 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 PLIN4Q96Q06 1357 aa10.08□□□□□ -0.8
TMEM258-201ENST00000257262 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 CNMDO75829 334 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 PCP11498 1178 aaKnown RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 HOXD10P28358 340 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 PRMT2P55345 433 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 ERVK-9P63128 1117 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 ERVK-24P63145 666 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 FAM83BQ5T0W9 1011 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 LBX2Q6XYB7 198 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 LRRC47Q8N1G4 583 aaKnown RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 GTF3C2Q8WUA4 911 aaPredicted RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 MAP4K1Q92918 833 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 ESYT1Q9BSJ8 1104 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 RNF41Q9H4P4 317 aaPredicted RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 BTBD7Q9P203 1132 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 SRRDQ9UH36 339 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 GABRQQ9UN88 632 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 RABGAP1Q9Y3P9 1069 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 PTCH2Q9Y6C5 1203 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 COL11A1P12107 1806 aaPredicted RBP10.07□□□□□ -0.8
TMEM258-201ENST00000257262 NEDD4P46934 1319 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 MYPNQ86TC9 1320 aa10.07□□□□□ -0.8
TMEM258-201ENST00000257262 PLXNB2O15031 1838 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 TNPO2O14787 897 aaKnown RBP10.06□□□□□ -0.8
TMEM258-201ENST00000257262 KDM4AO75164 1064 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 FLOT1O75955 427 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 NDUFB10O96000 172 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 CYP21A2P08686 494 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 NOVP48745 357 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 PRKCZQ05513 592 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 GMCL1P1Q8NEA9 526 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 ESR2Q92731 530 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 COA7Q96BR5 231 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 ZKSCAN3Q9BRR0 538 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 TCP11L1Q9NUJ3 509 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 FBXO28Q9NVF7 368 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 SYNPO2Q9UMS6 1093 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 A0A0G2JMZ2 1700 aa10.06□□□□□ -0.8
TMEM258-201ENST00000257262 B4E1Z4 1266 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 SNPHO15079 494 aa10.05□□□□□ -0.8
TMEM258-201ENST00000257262 BMP3P12645 472 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms