RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 TFE3P19532 575 aaPredicted RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 YY1P25490 414 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 LIG3P49916 1009 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 APOBRQ0VD83 1088 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 CAMK2GQ13555 558 aaPredicted RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 UBAP2LQ14157 1087 aaKnown RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 PRPF40BQ6NWY9 871 aaKnown RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 HFE2Q6ZVN8 426 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 RELL1Q8IUW5 271 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 PGBD3Q8N328 593 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 ASAP3Q8TDY4 903 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 BHMTQ93088 406 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 RUNDC1Q96C34 613 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 VPS33BQ9H267 617 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 DZANK1Q9NVP4 752 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 PNMA2Q9UL42 364 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 KCNH4Q9UQ05 1017 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 DYRK1BQ9Y463 629 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 LAMB2P55268 1798 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 KAT6BQ8WYB5 2073 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 BTBD11A6QL63 1104 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 POTECB2RU33 542 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 J3QW42 95 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 MAPTP10636 758 aaKnown RBP4.55□□□□□ -1.68
RBM39-201ENST00000253363 GYS1P13807 737 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 CD33P20138 364 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 EIF5P55010 431 aaKnown RBP4.55□□□□□ -1.68
RBM39-201ENST00000253363 PRR20EP86478 221 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PRR20CP86479 221 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PRR20DP86480 221 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PRR20BP86481 221 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PRR20AP86496 221 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 CCINQ13939 588 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 GPR162Q16538 588 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 STYK1Q6J9G0 422 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PTF1AQ7RTS3 328 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 IPO4Q8TEX9 1081 aaKnown RBP4.55□□□□□ -1.68
RBM39-201ENST00000253363 PMM1Q92871 262 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 SEC16BQ96JE7 1060 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PLA2G2EQ9NZK7 142 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 ANKRD36CQ5JPF3 1778 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 NFKBIEO00221 500 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 KLF4O43474 513 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 CREB3O43889 395 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 MMP10P09238 476 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 SOX9P48436 509 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 KCNQ4P56696 695 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 ATP11AP98196 1134 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 NFX1Q12986 1120 aaKnown RBP4.55□□□□□ -1.68
RBM39-201ENST00000253363 LONRF3Q496Y0 759 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 SEZ6Q53EL9 994 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 IFFO2Q5TF58 517 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 TTBK2Q6IQ55 1244 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 INTS5Q6P9B9 1019 aaKnown RBP4.55□□□□□ -1.68
RBM39-201ENST00000253363 KIF6Q6ZMV9 814 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 CEP120Q8N960 986 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 ABHD17AQ96GS6 310 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 TRIM55Q9BYV6 548 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 IGFLR1Q9H665 355 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 SNTG2Q9NY99 539 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 GABBR1Q9UBS5 961 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 PCDHB5Q9Y5E4 795 aa4.55□□□□□ -1.68
RBM39-201ENST00000253363 DDX60Q8IY21 1712 aaKnown RBP4.55□□□□□ -1.68
RBM39-201ENST00000253363 ATXN7O15265 892 aaPredicted RBP4.54□□□□□ -1.68
RBM39-201ENST00000253363 BNIP3LO60238 219 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 GREM1O60565 184 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 TM4SF1P30408 202 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 FAM193AP78312 1265 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 SPEM2Q0P670 501 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 MMRN1Q13201 1228 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 RAB33AQ14088 237 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 RASA3Q14644 834 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 EFHC2Q5JST6 749 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 SAMD5Q5TGI4 173 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 NLRP8Q86W28 1048 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 PNMA5Q96PV4 448 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 PLEKHF1Q96S99 279 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 BRIP1Q9BX63 1249 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 CHMP4BQ9H444 224 aaKnown RBP4.54□□□□□ -1.68
RBM39-201ENST00000253363 PIM2Q9P1W9 311 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 SUPT16HQ9Y5B9 1047 aaKnown RBP4.54□□□□□ -1.68
RBM39-201ENST00000253363 DUOX1Q9NRD9 1551 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 N4BP2Q86UW6 1770 aaPredicted RBP4.54□□□□□ -1.68
RBM39-201ENST00000253363 FAM187AA6NFU0 413 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 POLRMTO00411 1230 aaKnown RBP4.54□□□□□ -1.68
RBM39-201ENST00000253363 F13A1P00488 732 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 HMOX1P09601 288 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 FBLN1P23142 703 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 DALRD3Q5D0E6 543 aaKnown RBP4.54□□□□□ -1.68
RBM39-201ENST00000253363 SNAP47Q5SQN1 464 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 ZFYVE27Q5T4F4 411 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 CPLX3Q8WVH0 158 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 PMEPA1Q969W9 287 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 SHDQ96IW2 340 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 SEC31BQ9NQW1 1179 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 ST7Q9NRC1 585 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 PPM1HQ9ULR3 514 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 KDM2BQ8NHM5 1336 aa4.54□□□□□ -1.68
RBM39-201ENST00000253363 TIAM2Q8IVF5 1701 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms