RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 DDAH1O94760 285 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 ZRANB2O95218 330 aaKnown RBP eCLIP20.78■□□□□ 0.92
LRP3-201ENST00000253193 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
LRP3-201ENST00000253193 FXR1P51114 621 aaKnown RBP eCLIP20.78■□□□□ 0.92
LRP3-201ENST00000253193 CEP112Q8N8E3 955 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 ATRIPQ8WXE1 791 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 ZFP91Q96JP5 570 aaPredicted RBP20.78■□□□□ 0.92
LRP3-201ENST00000253193 CAPZA3Q96KX2 299 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 LUC7L2Q9Y383 392 aaKnown RBP20.78■□□□□ 0.92
LRP3-201ENST00000253193 ABCC6O95255 1503 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 PP2D1A8MPX8 630 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 MFAP3LO75121 409 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 LMAN1P49257 510 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 COPB1P53618 953 aaKnown RBP20.78■□□□□ 0.92
LRP3-201ENST00000253193 PANX2Q96RD6 677 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 DCP1AQ9NPI6 582 aaPredicted RBP20.78■□□□□ 0.92
LRP3-201ENST00000253193 PSMA7O14818 248 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 CYP2C19P33261 490 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 RIOK1Q9BRS2 568 aaKnown RBP20.78■□□□□ 0.92
LRP3-201ENST00000253193 CPVLQ9H3G5 476 aa20.78■□□□□ 0.92
LRP3-201ENST00000253193 TRIM49BA6NDI0 452 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 PIP4K2BP78356 416 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 TMTC1Q8IUR5 882 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 CDK5RAP3Q96JB5 506 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 PYM1Q9BRP8 204 aaKnown RBP20.77■□□□□ 0.92
LRP3-201ENST00000253193 BRIP1Q9BX63 1249 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 NAA15Q9BXJ9 866 aaKnown RBP20.77■□□□□ 0.92
LRP3-201ENST00000253193 BSDC1Q9NW68 430 aaPredicted RBP20.77■□□□□ 0.92
LRP3-201ENST00000253193 MRFAP1Q9Y605 127 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 ALS2Q96Q42 1657 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 NAPAP54920 295 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 MAP3K9P80192 1104 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 DPYDQ12882 1025 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 CYP26C1Q6V0L0 522 aa20.77■□□□□ 0.92
LRP3-201ENST00000253193 ADD3Q9UEY8 706 aaKnown RBP20.77■□□□□ 0.92
LRP3-201ENST00000253193 GTPBP6O43824 516 aaPredicted RBP20.77■□□□□ 0.91
LRP3-201ENST00000253193 NAP1L1P55209 391 aaKnown RBP20.77■□□□□ 0.91
LRP3-201ENST00000253193 ASIC1P78348 528 aa20.77■□□□□ 0.91
LRP3-201ENST00000253193 ATP2B2Q01814 1243 aa20.77■□□□□ 0.91
LRP3-201ENST00000253193 TGFBRAP1Q8WUH2 860 aa20.77■□□□□ 0.91
LRP3-201ENST00000253193 ATRNO75882 1429 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 USP17L3A6NCW0 530 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 USP17L4A6NCW7 530 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 LDHBP07195 334 aaKnown RBP20.76■□□□□ 0.91
LRP3-201ENST00000253193 TBX2Q13207 712 aaPredicted RBP20.76■□□□□ 0.91
LRP3-201ENST00000253193 USP17L1Q7RTZ2 530 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 GOLGA6L1Q8N7Z2 621 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 NAPGQ99747 312 aaPredicted RBP20.76■□□□□ 0.91
LRP3-201ENST00000253193 TTF2Q9UNY4 1162 aaKnown RBP20.76■□□□□ 0.91
LRP3-201ENST00000253193 TMEM139Q8IV31 216 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 MAPKAPK5Q8IW41 473 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 MED15Q96RN5 788 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.76■□□□□ 0.91
LRP3-201ENST00000253193 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
LRP3-201ENST00000253193 RGS22Q8NE09 1264 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 RABGGTAQ92696 567 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 MTA3Q9BTC8 594 aa20.76■□□□□ 0.91
LRP3-201ENST00000253193 ENC1O14682 589 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 IDEP14735 1019 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 RCAN1P53805 252 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 NT5DC1Q5TFE4 455 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 SMARCC1Q92922 1105 aaPredicted RBP20.75■□□□□ 0.91
LRP3-201ENST00000253193 GNPATO15228 680 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 TFRCP02786 760 aaKnown RBP20.75■□□□□ 0.91
LRP3-201ENST00000253193 SSBP05455 408 aaKnown RBP eCLIP20.75■□□□□ 0.91
LRP3-201ENST00000253193 CC2D1AQ6P1N0 951 aaPredicted RBP20.75■□□□□ 0.91
LRP3-201ENST00000253193 STAG2Q8N3U4 1231 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 PPP1R3GB7ZBB8 358 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 FAM193AP78312 1265 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 ATP2C1P98194 919 aaPredicted RBP20.75■□□□□ 0.91
LRP3-201ENST00000253193 DIXDC1Q155Q3 683 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 CCDC122Q5T0U0 273 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 DRC1Q96MC2 740 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 DEF6Q9H4E7 631 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 CDC23Q9UJX2 597 aa20.75■□□□□ 0.91
LRP3-201ENST00000253193 CAPN2P17655 700 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 SRGAP1Q7Z6B7 1085 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 NSUN4Q96CB9 384 aaKnown RBP20.74■□□□□ 0.91
LRP3-201ENST00000253193 TANGO6Q9C0B7 1094 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 EXOC1Q9NV70 894 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 SEC63Q9UGP8 760 aaKnown RBP20.74■□□□□ 0.91
LRP3-201ENST00000253193 ADAMTS7Q9UKP4 1686 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 TBC1D8O95759 1140 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 BAG3O95817 575 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 PRCPP42785 496 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 FAM98CQ17RN3 349 aaKnown RBP20.74■□□□□ 0.91
LRP3-201ENST00000253193 SPTY2D1Q68D10 685 aaPredicted RBP20.74■□□□□ 0.91
LRP3-201ENST00000253193 CSGALNACT2Q8N6G5 542 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 SLC44A5Q8NCS7 719 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
LRP3-201ENST00000253193 CCNT1O60563 726 aaKnown RBP20.74■□□□□ 0.91
LRP3-201ENST00000253193 LONRF2Q1L5Z9 754 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 VPS18Q9P253 973 aa20.74■□□□□ 0.91
LRP3-201ENST00000253193 EIF3JO75822 258 aaKnown RBP20.73■□□□□ 0.91
LRP3-201ENST00000253193 GYPCP04921 128 aa20.73■□□□□ 0.91
LRP3-201ENST00000253193 ATP8A2Q9NTI2 1148 aa20.73■□□□□ 0.91
LRP3-201ENST00000253193 TBC1D8BQ0IIM8 1120 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms