RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 LPIN2Q92539 896 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 CTAGE1Q96RT6 745 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
USHBP1-201ENST00000252597 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 A0A1B0GTH6 734 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 ZEB2O60315 1214 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 ATP1A1P05023 1023 aaKnown RBP13.47□□□□□ -0.25
USHBP1-201ENST00000252597 TBX2Q13207 712 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-201ENST00000252597 E2F4Q16254 413 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 BEND6Q5SZJ8 279 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-201ENST00000252597 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 KRT26Q7Z3Y9 468 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 ISCA1Q9BUE6 129 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
USHBP1-201ENST00000252597 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
USHBP1-201ENST00000252597 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 KCNJ6P48051 423 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 CCDC181Q5TID7 509 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 GPATCH11Q8N954 259 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 PIGBQ92521 554 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 RUFY1Q96T51 708 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 MMS19Q96T76 1030 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 FAM207AQ9NSI2 230 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-201ENST00000252597 ABHD10Q9NUJ1 306 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 TTC26A0AVF1 554 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-201ENST00000252597 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-201ENST00000252597 FAM53CQ9NYF3 392 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
USHBP1-201ENST00000252597 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.26
USHBP1-201ENST00000252597 SND1Q7KZF4 910 aaKnown RBP eCLIP13.46□□□□□ -0.26
USHBP1-201ENST00000252597 TMTC1Q8IUR5 882 aa13.46□□□□□ -0.26
USHBP1-201ENST00000252597 MMRN2Q9H8L6 949 aa13.46□□□□□ -0.26
USHBP1-201ENST00000252597 EHD2Q9NZN4 543 aa13.46□□□□□ -0.26
USHBP1-201ENST00000252597 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.26
USHBP1-201ENST00000252597 SAMM50Q9Y512 469 aa13.46□□□□□ -0.26
USHBP1-201ENST00000252597 COL5A2P05997 1499 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-201ENST00000252597 MYO1BO43795 1136 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 TBC1D8BQ0IIM8 1120 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 CARD10Q9BWT7 1032 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 EHD4Q9H223 541 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 ZHX3Q9H4I2 956 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 CCDC194A0A1B0GVG4 234 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 CYP2D6P10635 497 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 ERCC5P28715 1186 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-201ENST00000252597 LIFRP42702 1097 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 PRCPP42785 496 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 LIG3P49916 1009 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 ATP1A2P50993 1020 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 TYW1BQ6NUM6 668 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
USHBP1-201ENST00000252597 EXOC4Q96A65 974 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 JAKMIP2Q96AA8 810 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 PANX2Q96RD6 677 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 GBP3Q9H0R5 595 aa13.45□□□□□ -0.26
USHBP1-201ENST00000252597 ADGRA1Q86SQ6 560 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-201ENST00000252597 AFAP1L1Q8TED9 768 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 IFT81Q8WYA0 676 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 SAR1BQ9Y6B6 198 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 H0YHG0 523 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 ADAMTS3O15072 1205 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 MARCH6O60337 910 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 NDUFA10O95299 355 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 CCT5P48643 541 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 TDRD12Q587J7 1177 aaKnown RBP13.44□□□□□ -0.26
USHBP1-201ENST00000252597 SGMS1Q86VZ5 419 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 CSGALNACT2Q8N6G5 542 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 KCND1Q9NSA2 647 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
USHBP1-201ENST00000252597 AKR1B10O60218 316 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 PDE8AO60658 829 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
USHBP1-201ENST00000252597 ASIC1P78348 528 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 STIM1Q13586 685 aa13.44□□□□□ -0.26
USHBP1-201ENST00000252597 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 RPN1P04843 607 aaKnown RBP13.43□□□□□ -0.26
USHBP1-201ENST00000252597 SPA17Q15506 151 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 INF2Q27J81 1249 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 CCDC70Q6NSX1 233 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
USHBP1-201ENST00000252597 ZSCAN10Q96SZ4 725 aaPredicted RBP13.43□□□□□ -0.26
USHBP1-201ENST00000252597 BUB1O43683 1085 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 LETM2Q2VYF4 491 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 DYMQ7RTS9 669 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 SRLQ86TD4 932 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 OR8K1Q8NGG5 319 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 SCN11AQ9UI33 1791 aa13.43□□□□□ -0.26
USHBP1-201ENST00000252597 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
USHBP1-201ENST00000252597 GGCXP38435 758 aa13.42□□□□□ -0.26
USHBP1-201ENST00000252597 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
USHBP1-201ENST00000252597 TCP11X2Q5H9J9 407 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms