RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 GOLGA6L10A6NI86 522 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 FAM153BP0C7A2 387 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 GUCY2DQ02846 1103 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 FAM153CQ494X1 144 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 UBAC1Q9BSL1 405 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 FAM153AQ9UHL3 310 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 RCCD1A6NED2 376 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 PPP6R2O75170 966 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 IRX1P78414 480 aaPredicted RBP20.42■□□□□ 0.86
PTPN12-201ENST00000248594 PTGISQ16647 500 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 THEMIS2Q5TEJ8 643 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 CPLX4Q7Z7G2 160 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
PTPN12-201ENST00000248594 SPDYE1Q8NFV5 336 aaPredicted RBP20.42■□□□□ 0.86
PTPN12-201ENST00000248594 RASSF8Q8NHQ8 419 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 CTAGE1Q96RT6 745 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 MLXIPQ9HAP2 919 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 CABP5Q9NP86 173 aa20.42■□□□□ 0.86
PTPN12-201ENST00000248594 GOLGA8AA7E2F4 631 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 TRIM21P19474 475 aaKnown RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 IQCEQ6IPM2 695 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 HAUS4Q9H6D7 363 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 DNM1LO00429 736 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 VAV2P52735 878 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 ENOX2Q16206 610 aaKnown RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 FAM228AQ86W67 206 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 LINS1Q8NG48 757 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 NUP133Q8WUM0 1156 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 GGT7Q9UJ14 662 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 G3BP2Q9UN86 482 aaKnown RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 TMEM2Q9UHN6 1383 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 ZNF213O14771 459 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 KCNA6P17658 529 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 CARSP49589 748 aaKnown RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 COPB1P53618 953 aaKnown RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 PSMD2Q13200 908 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 COPS6Q7L5N1 327 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 OSBP2Q969R2 916 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 MS4A14Q96JA4 679 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
PTPN12-201ENST00000248594 EPB41L5Q9HCM4 733 aa20.41■□□□□ 0.86
PTPN12-201ENST00000248594 FGAP02671 866 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 ZKSCAN8Q15776 578 aaPredicted RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 TBC1D1Q86TI0 1168 aaPredicted RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 RBM28Q9NW13 759 aaKnown RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 A0A0G2JS52 829 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 DDX58O95786 925 aaKnown RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 NCOA7Q8NI08 942 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 AENQ8WTP8 325 aaKnown RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 CYFIP2Q96F07 1278 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 ZKSCAN3Q9BRR0 538 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 ZNHIT6Q9NWK9 470 aaKnown RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 B4E1Z4 1266 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 MOCS3O95396 460 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 HERVK_113P62684 666 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 KIF5AQ12840 1032 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 DPYDQ12882 1025 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 TTF1Q15361 905 aaPredicted RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 OR8K1Q8NGG5 319 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 ZNF483Q8TF39 744 aaPredicted RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 XAGE3Q8WTP9 111 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 ZCWPW1Q9H0M4 648 aa20.4■□□□□ 0.86
PTPN12-201ENST00000248594 A1CFQ9NQ94 594 aaKnown RBP20.4■□□□□ 0.86
PTPN12-201ENST00000248594 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.86
PTPN12-201ENST00000248594 FAM170AA1A519 330 aa20.39■□□□□ 0.86
PTPN12-201ENST00000248594 RASSF9O75901 435 aa20.39■□□□□ 0.86
PTPN12-201ENST00000248594 LMBR1Q8WVP7 490 aa20.39■□□□□ 0.86
PTPN12-201ENST00000248594 DDX17Q92841 729 aaKnown RBP20.39■□□□□ 0.86
PTPN12-201ENST00000248594 MYO1AQ9UBC5 1043 aa20.39■□□□□ 0.86
PTPN12-201ENST00000248594 LRWD1Q9UFC0 647 aa20.39■□□□□ 0.86
PTPN12-201ENST00000248594 PHF20L1A8MW92 1017 aa20.39■□□□□ 0.85
PTPN12-201ENST00000248594 PAFAH1B1P43034 410 aa20.39■□□□□ 0.85
PTPN12-201ENST00000248594 CEP120Q8N960 986 aa20.39■□□□□ 0.85
PTPN12-201ENST00000248594 HAUS7Q99871 368 aa20.39■□□□□ 0.85
PTPN12-201ENST00000248594 MDM2Q00987 491 aaPredicted RBP20.39■□□□□ 0.85
PTPN12-201ENST00000248594 GNPTABQ3T906 1256 aa20.39■□□□□ 0.85
PTPN12-201ENST00000248594 MAP3K14Q99558 947 aa20.39■□□□□ 0.85
PTPN12-201ENST00000248594 TRIM49BA6NDI0 452 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 KCNJ18B7U540 433 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 BUB1O43683 1085 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 GUCY1A2P33402 732 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 RBM5P52756 815 aaKnown RBP eCLIP20.38■□□□□ 0.857e-9■■■□□ 17.6
PTPN12-201ENST00000248594 KCNJ12Q14500 433 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 TRADDQ15628 312 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 QPCTQ16769 361 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 TRIM68Q6AZZ1 485 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 SPATA4Q8NEY3 305 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 SAAL1Q96ER3 474 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 NLRP3Q96P20 1036 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 LGR5O75473 907 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 FAM133BQ5BKY9 247 aaKnown RBP20.38■□□□□ 0.85
PTPN12-201ENST00000248594 PLIN2Q99541 437 aa20.38■□□□□ 0.85
PTPN12-201ENST00000248594 TARSL2A2RTX5 802 aaKnown RBP20.37■□□□□ 0.85
PTPN12-201ENST00000248594 FAM205CA6NFA0 338 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 EPHB4P54760 987 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 KLHL7Q8IXQ5 586 aa20.37■□□□□ 0.85
PTPN12-201ENST00000248594 EHBP1Q8NDI1 1231 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms