RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SKOR2Q2VWA4 1001 aaPredicted RBP9.55□□□□□ -0.88
CXCR4-201ENST00000241393 IP6K1Q92551 441 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 KBTBD4Q9NVX7 518 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 INPP5FQ9Y2H2 1132 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 NFAT5O94916 1531 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 MED1Q15648 1581 aaPredicted RBP9.55□□□□□ -0.88
CXCR4-201ENST00000241393 CEMIPQ8WUJ3 1361 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 SDSP20132 328 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 GSTM4Q03013 218 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 FAAP100Q0VG06 881 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 ZNF423Q2M1K9 1284 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 G2E3Q7L622 706 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 ANKLE2Q86XL3 938 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 SULF2Q8IWU5 870 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 KCNH5Q8NCM2 988 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 SLC7A3Q8WY07 619 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 AOX1Q06278 1338 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 LINC01387J3KSC0 135 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 FSCN2O14926 492 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 EPB41L2O43491 1005 aaKnown RBP9.54□□□□□ -0.88
CXCR4-201ENST00000241393 CELA3AP09093 270 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 ARNTP27540 789 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 ATP8B2P98198 1209 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 RAD51AP2Q09MP3 1159 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 NAALADL2Q58DX5 795 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 PCNX4Q63HM2 1172 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 PODNQ7Z5L7 613 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 MIS18AQ9NYP9 233 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 SALL3Q9BXA9 1300 aa9.54□□□□□ -0.88
CXCR4-201ENST00000241393 OVOS2A0A0G2JMS6 1433 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 LMTK3Q96Q04 1460 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 GOLGA6L3A6NEY3 463 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 ERC2O15083 957 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
CXCR4-201ENST00000241393 PDE1AP54750 535 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 LLGL2Q6P1M3 1020 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 SLC4A10Q6U841 1118 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 AGMOQ6ZNB7 445 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 CCDC84Q86UT8 332 aaPredicted RBP9.53□□□□□ -0.88
CXCR4-201ENST00000241393 KIAA0825Q8IV33 1275 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 C16orf71Q8IYS4 520 aaPredicted RBP9.53□□□□□ -0.88
CXCR4-201ENST00000241393 TNPO1Q92973 898 aaKnown RBP9.53□□□□□ -0.88
CXCR4-201ENST00000241393 CORO1BQ9BR76 489 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 CBX8Q9HC52 389 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 CAPN10Q9HC96 672 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
CXCR4-201ENST00000241393 F6X3S4 739 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 SOX1O00570 391 aaPredicted RBP9.52□□□□□ -0.89
CXCR4-201ENST00000241393 CDC25BP30305 580 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 DGKGP49619 791 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 ZNF157P51786 506 aaPredicted RBP9.52□□□□□ -0.89
CXCR4-201ENST00000241393 NUCB2P80303 420 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 LMNB2Q03252 620 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 SUZ12Q15022 739 aaKnown RBP9.52□□□□□ -0.89
CXCR4-201ENST00000241393 ZNF394Q53GI3 561 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 PHC3Q8NDX5 983 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 LRRCC1Q9C099 1032 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 MIR1-1HGQ9H1L0 117 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 CWC22Q9HCG8 908 aaKnown RBP9.52□□□□□ -0.89
CXCR4-201ENST00000241393 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.89
CXCR4-201ENST00000241393 STAP2Q9UGK3 403 aa9.52□□□□□ -0.89
CXCR4-201ENST00000241393 IBTKQ9P2D0 1353 aaPredicted RBP9.52□□□□□ -0.89
CXCR4-201ENST00000241393 EIF4A3P38919 411 aaKnown RBP9.51□□□□□ -0.89
CXCR4-201ENST00000241393 BAG6P46379 1132 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 SNAP47Q5SQN1 464 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-201ENST00000241393 DMRTC2Q8IXT2 367 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-201ENST00000241393 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 SLC43A3Q8NBI5 491 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 OTUD7AQ8TE49 926 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-201ENST00000241393 IL17RAQ96F46 866 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 LTN1O94822 1766 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 GOLGA6L22H0YM25 854 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 GNB5O14775 395 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-201ENST00000241393 RAB11FIP3O75154 756 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 NID1P14543 1247 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 MCM2P49736 904 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 MRE11P49959 708 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 PCDHGB7Q9Y5F8 929 aa9.51□□□□□ -0.89
CXCR4-201ENST00000241393 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 LMO7Q8WWI1 1683 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 SLIT3O75094 1523 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 ANAPC15P60006 121 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 POU4F3Q15319 338 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 SSH3Q8TE77 659 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 COPRSQ9NQ92 184 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 TUBGCP6Q96RT7 1819 aa9.5□□□□□ -0.89
CXCR4-201ENST00000241393 MST1RQ04912 1400 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 SETD1BQ9UPS6 1966 aaKnown RBP9.49□□□□□ -0.89
CXCR4-201ENST00000241393 WIPF1O43516 503 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 UBTFL1P0CB47 393 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms