RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 PCP11498 1178 aaKnown RBP13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 TXKP42681 527 aa13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 CPXCR1Q8N123 301 aa13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
PCDHB12-201ENST00000239450 RGL2O15211 777 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 RHBDL3P58872 404 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 UBE2SQ16763 222 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 TTLL1O95922 423 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 PPP4CP60510 307 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 PPP2R5BQ15173 497 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 TMC6Q7Z403 805 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 CCDC12Q8WUD4 166 aaPredicted RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 HOMER2Q9NSB8 354 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 KIAA1468Q9P260 1216 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 TRMT1Q9NXH9 659 aaKnown RBP13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
PCDHB12-201ENST00000239450 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 FOXN1O15353 648 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 CUTAO60888 179 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 EARS2Q5JPH6 523 aaKnown RBP13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 CERS3Q8IU89 383 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 TRMT44Q8IYL2 757 aaKnown RBP13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 FBXO41Q8TF61 875 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 EEF2KMTQ96G04 330 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 IDEP14735 1019 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 CMA1P23946 247 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 PPP1R9BQ96SB3 815 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 TMEM260Q9NX78 707 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 EVCP57679 992 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
PCDHB12-201ENST00000239450 CLCN1P35523 988 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 LONRF3Q496Y0 759 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 FAM177A1Q8N128 213 aaPredicted RBP13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 IFNKQ9P0W0 207 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 SALL1Q9NSC2 1324 aa13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 MYO5AQ9Y4I1 1855 aaKnown RBP13.27□□□□□ -0.28
PCDHB12-201ENST00000239450 STAT6P42226 847 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 UBXN2AP68543 259 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 RASSF7Q02833 373 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 CIAPIN1Q6FI81 312 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 C16orf86Q6ZW13 317 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 SAMD7Q7Z3H4 446 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 FOXP1Q9H334 677 aaPredicted RBP13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 GNA11P29992 359 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 CPLX3Q8WVH0 158 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 DACH1Q9UI36 760 aa13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.27□□□□□ -0.29
PCDHB12-201ENST00000239450 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 ERCC3P19447 782 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 CAVIN2O95810 425 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 DACT2Q5SW24 774 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 SMYD4Q8IYR2 804 aaPredicted RBP13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 NOC3LQ8WTT2 800 aaKnown RBP13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 PP2D1A8MPX8 630 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 CFBP00751 764 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 RAD51AP2Q09MP3 1159 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 SHC4Q6S5L8 630 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 BAZ2AQ9UIF9 1905 aaKnown RBP13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 FZD1Q9UP38 647 aa13.26□□□□□ -0.29
PCDHB12-201ENST00000239450 TECP42680 631 aa13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 KARSQ15046 597 aaKnown RBP13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 A0A1W2PQ27 194 aa13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 A0A1W2PQ64 194 aa13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 A0A1W2PQD8 194 aa13.25□□□□□ -0.29
PCDHB12-201ENST00000239450 SFPQP23246 707 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms