RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 ERMP1Q7Z2K6 904 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 GBF1Q92538 1859 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 IL23AQ9NPF7 189 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 PALD1Q9ULE6 856 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 ZNF318Q5VUA4 2279 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 MYO5AQ9Y4I1 1855 aaKnown RBP10.19□□□□□ -0.78
IFT43-201ENST00000238628 CHD9Q3L8U1 2897 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 CNMDO75829 334 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 CT47B1P0C2W7 299 aaPredicted RBP10.19□□□□□ -0.78
IFT43-201ENST00000238628 MTX1Q13505 466 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 SHROOM1Q2M3G4 852 aaPredicted RBP10.19□□□□□ -0.78
IFT43-201ENST00000238628 SAMD1Q6SPF0 538 aaPredicted RBP10.19□□□□□ -0.78
IFT43-201ENST00000238628 METTL16Q86W50 562 aaKnown RBP10.19□□□□□ -0.78
IFT43-201ENST00000238628 NUP133Q8WUM0 1156 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 DNAJC18Q9H819 358 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 SNRKQ9NRH2 765 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 ZBTB21Q9ULJ3 1066 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 SLC4A7Q9Y6M7 1214 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 MYH1P12882 1939 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 FOCADQ5VW36 1801 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 SPTBN4Q9H254 2564 aa10.19□□□□□ -0.78
IFT43-201ENST00000238628 FLT1P17948 1338 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 HLA-DOAP06340 250 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 ADORA2AP29274 412 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 CCDC158Q5M9N0 1113 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 TTC39AQ5SRH9 613 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 ATF7IPQ6VMQ6 1270 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
IFT43-201ENST00000238628 PRSS33Q8NF86 280 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 ARNTL2Q8WYA1 636 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 SLC5A4Q9NY91 659 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
IFT43-201ENST00000238628 BRWD1Q9NSI6 2320 aa10.18□□□□□ -0.78
IFT43-201ENST00000238628 SMCHD1A6NHR9 2005 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 MROH7Q68CQ1 1323 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 EPOPA6NHQ4 379 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 KRT37O76014 449 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 GNAI2P04899 355 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 CYP2C18P33260 490 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 ACLYP53396 1101 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 ZYXQ15942 572 aaKnown RBP10.17□□□□□ -0.78
IFT43-201ENST00000238628 TMEM67Q5HYA8 995 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 CATSPERGQ6ZRH7 1159 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 ADGRA1Q86SQ6 560 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 ARHGAP45Q92619 1136 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 VTI1AQ96AJ9 217 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 FEZ1Q99689 392 aa10.17□□□□□ -0.78
IFT43-201ENST00000238628 TSEN34Q9BSV6 310 aaKnown RBP10.17□□□□□ -0.78
IFT43-201ENST00000238628 REV3LO60673 3130 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 PNMA6EA0A0J9YXQ4 647 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 TLR3O15455 904 aaKnown RBP10.16□□□□□ -0.78
IFT43-201ENST00000238628 STRNO43815 780 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 GH2P01242 217 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 CYP2E1P05181 493 aaPredicted RBP10.16□□□□□ -0.78
IFT43-201ENST00000238628 CA3P07451 260 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 IL9P15248 144 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 ATP2A2P16615 1042 aaKnown RBP10.16□□□□□ -0.78
IFT43-201ENST00000238628 USP14P54578 494 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 DYNLL1P63167 89 aaKnown RBP10.16□□□□□ -0.78
IFT43-201ENST00000238628 C12orf42Q96LP6 360 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 BTBD7Q9P203 1132 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 CHD7Q9P2D1 2997 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
IFT43-201ENST00000238628 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 IGSF3O75054 1194 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 COBLO75128 1261 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 CYP7A1P22680 504 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 USP5P45974 858 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 RARSP54136 660 aaKnown RBP10.15□□□□□ -0.78
IFT43-201ENST00000238628 GRB10Q13322 594 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 LEXMQ3ZCV2 418 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 IER5LQ5T953 404 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 PTCRAQ6ISU1 281 aaPredicted RBP10.15□□□□□ -0.78
IFT43-201ENST00000238628 TATDN1Q6P1N9 297 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.15□□□□□ -0.78
IFT43-201ENST00000238628 GLT1D1Q96MS3 346 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 PRRX2Q99811 253 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 DBNDD2Q9BQY9 259 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 UBE2ZQ9H832 354 aaPredicted RBP10.15□□□□□ -0.78
IFT43-201ENST00000238628 CABP5Q9NP86 173 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 GPR108Q9NPR9 543 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 WDFY4Q6ZS81 3184 aa10.15□□□□□ -0.78
IFT43-201ENST00000238628 ZFHX2Q9C0A1 2572 aaPredicted RBP10.15□□□□□ -0.79
IFT43-201ENST00000238628 ZNF536O15090 1300 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms