RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NPTXRO95502 500 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 TRMT44Q8IYL2 757 aaKnown RBP14.51□□□□□ -0.09
MSH2-201ENST00000233146 MLKLQ8NB16 471 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 TEKT4Q8WW24 435 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 PANK4Q9NVE7 773 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 CRB1P82279 1406 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 TAF5LO75529 589 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 OATP04181 439 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 CNGA1P29973 690 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 CCNG1P51959 295 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 ZMYM1Q5SVZ6 1142 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 SYNE3Q6ZMZ3 975 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
MSH2-201ENST00000233146 ZNF589Q86UQ0 364 aaPredicted RBP14.51□□□□□ -0.09
MSH2-201ENST00000233146 AIDAQ96BJ3 306 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 DTNBP1Q96EV8 351 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 GPATCH3Q96I76 525 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 LRRC2Q9BYS8 371 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 HAUS4Q9H6D7 363 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 PIDD1Q9HB75 910 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 PICK1Q9NRD5 415 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 ZNF185O15231 689 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
MSH2-201ENST00000233146 SHC4Q6S5L8 630 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 ARMC9Q7Z3E5 817 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 TRIM42Q8IWZ5 723 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 CCDC63Q8NA47 563 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 C8orf76Q96K31 380 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 TRIM4Q9C037 500 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 DNAAF2Q9NVR5 837 aaKnown RBP14.5□□□□□ -0.09
MSH2-201ENST00000233146 ANKIB1Q9P2G1 1089 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 ADD3Q9UEY8 706 aaKnown RBP14.5□□□□□ -0.09
MSH2-201ENST00000233146 MAN1B1Q9UKM7 699 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 CLTAP09496 248 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 MDM2Q00987 491 aaPredicted RBP14.5□□□□□ -0.09
MSH2-201ENST00000233146 ITIH3Q06033 890 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 SLC39A14Q15043 492 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 LONRF3Q496Y0 759 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 CFAP58Q5T655 872 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
MSH2-201ENST00000233146 FAM167BQ9BTA0 163 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 PXDNLA1KZ92 1463 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 NEXMIFQ5QGS0 1516 aa14.5□□□□□ -0.09
MSH2-201ENST00000233146 GSTA1P08263 222 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 CCND1P24385 295 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 SCNN1BP51168 640 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 ZNF572Q7Z3I7 529 aaPredicted RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 MAATS1Q7Z4T9 603 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 NBPF15Q8N660 670 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 CCDC97Q96F63 343 aaPredicted RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 ABHD10Q9NUJ1 306 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 ABLIM1O14639 778 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 UPP2O95045 317 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 ACBD5Q5T8D3 534 aaPredicted RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 SLC9C2Q5TAH2 1124 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 ELOA2Q8IYF1 753 aaPredicted RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 TMEM165Q9HC07 324 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 DACH1Q9UI36 760 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 C2CD2Q9Y426 696 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 ITIH6Q6UXX5 1313 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 MAP3K13O43283 966 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 MARCKSP29966 332 aaPredicted RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 DBN1Q16643 649 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 CCDC102BQ68D86 513 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 ARFGAP2Q8N6H7 521 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 CCDC43Q96MW1 224 aaKnown RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 NCOA5Q9HCD5 579 aaKnown RBP14.49□□□□□ -0.09
MSH2-201ENST00000233146 PCMTD2Q9NV79 361 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 SLC12A4Q9UP95 1085 aa14.49□□□□□ -0.09
MSH2-201ENST00000233146 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 CFAP73A6NFT4 308 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 GOLGA6L10A6NI86 522 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 CYP27B1O15528 508 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 ALDH3A1P30838 453 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 PNMA8AQ86V59 439 aaPredicted RBP14.48□□□□□ -0.09
MSH2-201ENST00000233146 MOV10L1Q9BXT6 1211 aaKnown RBP14.48□□□□□ -0.09
MSH2-201ENST00000233146 SLC12A6Q9UHW9 1150 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 EPN1Q9Y6I3 576 aaPredicted RBP14.48□□□□□ -0.09
MSH2-201ENST00000233146 MYBPC3Q14896 1274 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 ANKRD20A2Q5SQ80 823 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 ANKRD20A1Q5TYW2 823 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 ANKRD20A3Q5VUR7 823 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 RESP18Q5W5W9 173 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 OTUD7BQ6GQQ9 843 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 ANKRD27Q96NW4 1050 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 CCT8L1PA6NM43 557 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 N4BP3O15049 544 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 MXRA7P84157 204 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 SFSWAPQ12872 951 aaKnown RBP14.48□□□□□ -0.09
MSH2-201ENST00000233146 NT5DC1Q5TFE4 455 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 RMI1Q9H9A7 625 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 STIM2Q9P246 746 aa14.48□□□□□ -0.09
MSH2-201ENST00000233146 ANO9A1A5B4 782 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 SPDYE5A6NIY4 337 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 TRIM37O94972 964 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 NDUFA10O95299 355 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 GNAQP50148 359 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 MORC3Q14149 939 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 GKAP1Q5VSY0 366 aaPredicted RBP14.47□□□□□ -0.09
MSH2-201ENST00000233146 ARMCX6Q7L4S7 300 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms