RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 RMND1Q9NWS8 449 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 NFU1Q9UMS0 254 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
PRDM4-201ENST00000228437 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
PRDM4-201ENST00000228437 CUL4BQ13620 913 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 RRAGAQ7L523 313 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 SUFUQ9UMX1 484 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 MMP1P03956 469 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 CYP7A1P22680 504 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 ARHGAP25P42331 645 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 PLBD2Q8NHP8 589 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 UHMK1Q8TAS1 419 aaKnown RBP16.22■□□□□ 0.19
PRDM4-201ENST00000228437 PDE4DQ08499 809 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 CCDC40Q4G0X9 1142 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
PRDM4-201ENST00000228437 APBA1Q02410 837 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 RASGRP2Q7LDG7 609 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 TMEM139Q8IV31 216 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 ZNF654Q8IZM8 581 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 RASGRP4Q8TDF6 673 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 SLC52A2Q9HAB3 445 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
PRDM4-201ENST00000228437 JAG2Q9Y219 1238 aa16.22■□□□□ 0.19
PRDM4-201ENST00000228437 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 HNRNPLLQ8WVV9 542 aaKnown RBP16.21■□□□□ 0.19
PRDM4-201ENST00000228437 KRT18P05783 430 aaKnown RBP16.21■□□□□ 0.19
PRDM4-201ENST00000228437 PTPAQ15257 358 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 HSD3B7Q9H2F3 369 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 LUC7LQ9NQ29 371 aaKnown RBP16.21■□□□□ 0.19
PRDM4-201ENST00000228437 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 KRT12Q99456 494 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 VEZTQ9HBM0 779 aa16.21■□□□□ 0.19
PRDM4-201ENST00000228437 GEMIN8Q9NWZ8 242 aaKnown RBP16.21■□□□□ 0.19
PRDM4-201ENST00000228437 ARHGEF28Q8N1W1 1705 aaKnown RBP16.21■□□□□ 0.19
PRDM4-201ENST00000228437 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.18
PRDM4-201ENST00000228437 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.18
PRDM4-201ENST00000228437 EVA1CP58658 441 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 RASSF7Q02833 373 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 TRIM14Q14142 442 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 PPP1R7Q15435 360 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 FANCBQ8NB91 859 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 ARL8AQ96BM9 186 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 ORAI2Q96SN7 254 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 KCND1Q9NSA2 647 aa16.21■□□□□ 0.18
PRDM4-201ENST00000228437 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 NEDD4P46934 1319 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 CLTAP09496 248 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 ANKLE2Q86XL3 938 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 PDE6AP16499 860 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 HEXIM1O94992 359 aaKnown RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 PHKA1P46020 1223 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 IFT20Q8IY31 132 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 IFNL3Q8IZI9 196 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 ESR2Q92731 530 aa16.2■□□□□ 0.18
PRDM4-201ENST00000228437 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 NHEJ1Q9H9Q4 299 aaPredicted RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 SRPRBQ9Y5M8 271 aaKnown RBP16.2■□□□□ 0.18
PRDM4-201ENST00000228437 DYMQ7RTS9 669 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 TCP11Q8WWU5 503 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 DMGDHQ9UI17 866 aaKnown RBP16.19■□□□□ 0.18
PRDM4-201ENST00000228437 FBXO2Q9UK22 296 aaPredicted RBP16.19■□□□□ 0.18
PRDM4-201ENST00000228437 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 FTCDO95954 541 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 RPN1P04843 607 aaKnown RBP16.19■□□□□ 0.18
PRDM4-201ENST00000228437 MYBL2P10244 700 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
PRDM4-201ENST00000228437 USP5P45974 858 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 TCP11X2Q5H9J9 407 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 HDAC7Q8WUI4 952 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 CNNM2Q9H8M5 875 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 TCP11L1Q9NUJ3 509 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 BUB1BO60566 1050 aaPredicted RBP16.19■□□□□ 0.18
PRDM4-201ENST00000228437 ITGA6P23229 1130 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 ADAT2Q7Z6V5 191 aaKnown RBP16.19■□□□□ 0.18
PRDM4-201ENST00000228437 MICAL1Q8TDZ2 1067 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 GSDMAQ96QA5 445 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 AGPAT5Q9NUQ2 364 aa16.19■□□□□ 0.18
PRDM4-201ENST00000228437 CLGNO14967 610 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 KIF4AO95239 1232 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 TUBGCP2Q9BSJ2 902 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 A0A1B0GUA9 196 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 TSPY2A6NKD2 308 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 EHHADHQ08426 723 aa16.18■□□□□ 0.18
PRDM4-201ENST00000228437 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms