RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 SMARCC2Q8TAQ2 1214 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 TLL2Q9Y6L7 1015 aa16.36■□□□□ 0.21
SEC61B-201ENST00000223641 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 PLA2G6O60733 806 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 GNAQP50148 359 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 HUNKP57058 714 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 NSUN7Q8NE18 718 aaKnown RBP16.35■□□□□ 0.21
SEC61B-201ENST00000223641 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 HHIPL1Q96JK4 782 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
SEC61B-201ENST00000223641 FEZ1Q99689 392 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 LZTS2Q9BRK4 669 aa16.35■□□□□ 0.21
SEC61B-201ENST00000223641 PARP14Q460N5 1801 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
SEC61B-201ENST00000223641 TMEM88BA6NKF7 163 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 KLRF2D3W0D1 207 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
SEC61B-201ENST00000223641 BMP3P12645 472 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 SLC1A4P43007 532 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
SEC61B-201ENST00000223641 SRBD1Q8N5C6 995 aaKnown RBP16.34■□□□□ 0.21
SEC61B-201ENST00000223641 WNK4Q96J92 1243 aa16.34■□□□□ 0.21
SEC61B-201ENST00000223641 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.34■□□□□ 0.21
SEC61B-201ENST00000223641 RLFQ13129 1914 aa16.33■□□□□ 0.21
SEC61B-201ENST00000223641 CYTH3O43739 400 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.2
SEC61B-201ENST00000223641 HMGCS2P54868 508 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 MOGSQ13724 837 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 ZYXQ15942 572 aaKnown RBP16.33■□□□□ 0.2
SEC61B-201ENST00000223641 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
SEC61B-201ENST00000223641 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 RIOX1Q9H6W3 641 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 MTMR7Q9Y216 660 aa16.33■□□□□ 0.2
SEC61B-201ENST00000223641 CPLX1O14810 134 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 CDKL5O76039 1030 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
SEC61B-201ENST00000223641 VCAM1P19320 739 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 DGKZQ13574 1117 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 SPRYD7Q5W111 196 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
SEC61B-201ENST00000223641 TTBK2Q6IQ55 1244 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 RGMBQ6NW40 437 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 KCTD1Q719H9 257 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
SEC61B-201ENST00000223641 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
SEC61B-201ENST00000223641 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 MTMR8Q96EF0 704 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
SEC61B-201ENST00000223641 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
SEC61B-201ENST00000223641 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
SEC61B-201ENST00000223641 MYH6P13533 1939 aa16.31■□□□□ 0.2
SEC61B-201ENST00000223641 JAK2O60674 1132 aa16.31■□□□□ 0.2
SEC61B-201ENST00000223641 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
SEC61B-201ENST00000223641 CCDC96Q2M329 555 aa16.31■□□□□ 0.2
SEC61B-201ENST00000223641 FAM83BQ5T0W9 1011 aa16.31■□□□□ 0.2
SEC61B-201ENST00000223641 RASAL3Q86YV0 1011 aa16.31■□□□□ 0.2
SEC61B-201ENST00000223641 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
SEC61B-201ENST00000223641 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
SEC61B-201ENST00000223641 RAD21O60216 631 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
SEC61B-201ENST00000223641 APLP1P51693 650 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 STAT2P52630 851 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 HMGN5P82970 282 aaKnown RBP16.3■□□□□ 0.2
SEC61B-201ENST00000223641 SNAPC2Q13487 334 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 FAM160B2Q86V87 743 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 CHURC1Q8WUH1 139 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 PHKBQ93100 1093 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 TMOD4Q9NZQ9 345 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
SEC61B-201ENST00000223641 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
SEC61B-201ENST00000223641 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
SEC61B-201ENST00000223641 SLC10A3P09131 477 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 ZNF157P51786 506 aaPredicted RBP16.29■□□□□ 0.2
SEC61B-201ENST00000223641 GTF2A2P52657 109 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
SEC61B-201ENST00000223641 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 FASTKD5Q7L8L6 764 aaKnown RBP16.29■□□□□ 0.2
SEC61B-201ENST00000223641 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 CPVLQ9H3G5 476 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
SEC61B-201ENST00000223641 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
SEC61B-201ENST00000223641 CREBZFQ9NS37 354 aa16.29■□□□□ 0.2
SEC61B-201ENST00000223641 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms