RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ST5P78524 1137 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 PDE4DQ08499 809 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 KCNJ12Q14500 433 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 MCM6Q14566 821 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 TOGARAM2Q6ZUX3 1019 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 PHRF1Q9P1Y6 1649 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 PHLPP2Q6ZVD8 1323 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 RHOXF2BP0C7M4 288 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 TNNI2P48788 182 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 RHOXF2Q9BQY4 288 aa16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 TRPM3Q9HCF6 1732 aaPredicted RBP16.84■□□□□ 0.29
UBE2D4-201ENST00000222402 CSGALNACT2Q8N6G5 542 aa16.83■□□□□ 0.29
UBE2D4-201ENST00000222402 EYA3Q99504 573 aa16.83■□□□□ 0.29
UBE2D4-201ENST00000222402 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.29
UBE2D4-201ENST00000222402 ZNF142P52746 1687 aaPredicted RBP16.83■□□□□ 0.29
UBE2D4-201ENST00000222402 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 KCPQ6ZWJ8 1503 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 CTAGE8P0CG41 777 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 TXKP42681 527 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 TRAPPC10P48553 1259 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 C3orf67Q6ZVT6 689 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 CTAGE6Q86UF2 777 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 CTAGE4Q8IX94 777 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 TMTC1Q8IUR5 882 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 SLC44A5Q8NCS7 719 aa16.83■□□□□ 0.28
UBE2D4-201ENST00000222402 TBC1D8BQ0IIM8 1120 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 FAM114A1Q8IWE2 563 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 RIOK1Q9BRS2 568 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 EIF3JO75822 258 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 PLCG2P16885 1265 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CHMP4BP1P59074 171 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CUL4BQ13620 913 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CYP26C1Q6V0L0 522 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 SMCO2A6NFE2 343 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 ERCC3P19447 782 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 LONP1P36776 959 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 TROAPQ12815 778 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 ENOX2Q16206 610 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CACNA2D4Q7Z3S7 1137 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 CABP7Q86V35 215 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 LINC00116Q8NCU8 138 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 NAA15Q9BXJ9 866 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 GGA1Q9UJY5 639 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-201ENST00000222402 EFCAB8A8MWE9 144 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 SEC23AQ15436 765 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 COPB1P53618 953 aaKnown RBP16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 PFKFB3Q16875 520 aaPredicted RBP16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 GDAQ9Y2T3 454 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 BTDP43251 543 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 MTF1Q14872 753 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 MFSD14BQ5SR56 506 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 GPIHBP1Q8IV16 184 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
UBE2D4-201ENST00000222402 BIN2Q9UBW5 565 aaPredicted RBP16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 ADAMTSL3P82987 1691 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 CLCN6P51797 869 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 TDRD12Q587J7 1177 aaKnown RBP16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 MMRN2Q9H8L6 949 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 JADE2Q9NQC1 790 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 EARS2Q5JPH6 523 aaKnown RBP16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 CCDC181Q5TID7 509 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 ANAPC4Q9UJX5 808 aa16.8■□□□□ 0.28
UBE2D4-201ENST00000222402 TRIM14Q14142 442 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 KRT31Q15323 416 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 KRT25Q7Z3Z0 450 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 CAPZA3Q96KX2 299 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 DRC1Q96MC2 740 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 NAPGQ99747 312 aaPredicted RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 TSG101Q99816 390 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 GBP3Q9H0R5 595 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 BICDL2A1A5D9 508 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 RPS6KA4O75676 772 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 SEC31AO94979 1220 aaKnown RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 TECP42680 631 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 DNA2P51530 1060 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 ACRBPQ8NEB7 543 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 NOC4LQ9BVI4 516 aaKnown RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 ORC4O43929 436 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 AKR1B10O60218 316 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms