RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 REXO1Q8N1G1 1221 aaKnown RBP16.35■□□□□ 0.21
UBR5-201ENST00000220959 JADE1Q6IE81 842 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 SAT1P21673 171 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 RPS6KC1Q96S38 1066 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 NLRC4Q9NPP4 1024 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
UBR5-201ENST00000220959 CPA1P15085 419 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
UBR5-201ENST00000220959 GARSP41250 739 aaKnown RBP16.34■□□□□ 0.21
UBR5-201ENST00000220959 PHKBQ93100 1093 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 UHRF1BP1LA0JNW5 1464 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 LRRC43Q8N309 656 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 S100BP04271 92 aaPredicted RBP16.34■□□□□ 0.21
UBR5-201ENST00000220959 TMOD1P28289 359 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 COG7P83436 770 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 CDR2Q01850 454 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 ZNF449Q6P9G9 518 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 NCOA5Q9HCD5 579 aaKnown RBP16.34■□□□□ 0.21
UBR5-201ENST00000220959 MMEL1Q495T6 779 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 MCTP2Q6DN12 878 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 HDAC11Q96DB2 347 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 TFAP4Q01664 338 aa16.34■□□□□ 0.21
UBR5-201ENST00000220959 GPR162Q16538 588 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 PARD3BQ8TEW8 1205 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 IGSF3O75054 1194 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 TNFAIP1Q13829 316 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.21
UBR5-201ENST00000220959 POMGNT1Q8WZA1 660 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.21
UBR5-201ENST00000220959 TYW5A2RUC4 315 aaKnown RBP16.33■□□□□ 0.21
UBR5-201ENST00000220959 RINT1Q6NUQ1 792 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 USP26Q9BXU7 913 aa16.33■□□□□ 0.21
UBR5-201ENST00000220959 VAMP4O75379 141 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 ABCB4P21439 1286 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 ECE1P42892 770 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 NME8Q8N427 588 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.2
UBR5-201ENST00000220959 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 IFIH1Q9BYX4 1025 aaKnown RBP16.33■□□□□ 0.2
UBR5-201ENST00000220959 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
UBR5-201ENST00000220959 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 ARHGAP6O43182 974 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 IQCDQ96DY2 449 aa16.33■□□□□ 0.2
UBR5-201ENST00000220959 BAG2O95816 211 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 ABI1Q8IZP0 508 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 SESTD1Q86VW0 696 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 SMC5Q8IY18 1101 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 FAM207AQ9NSI2 230 aaPredicted RBP16.32■□□□□ 0.2
UBR5-201ENST00000220959 MROH5Q6ZUA9 1318 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 MUM1Q2TAK8 710 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 ADCY8P40145 1251 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 C1orf112Q9NSG2 853 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
UBR5-201ENST00000220959 IRAK4Q9NWZ3 460 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 NFE2L3Q9Y4A8 694 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 SPATA5Q8NB90 893 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 IP6K1Q92551 441 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 PCDHA12Q9UN75 941 aa16.32■□□□□ 0.2
UBR5-201ENST00000220959 OPHN1O60890 802 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 PDE6CP51160 858 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 BLZF1Q9H2G9 400 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
UBR5-201ENST00000220959 XKR9Q5GH70 373 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 MTX1Q13505 466 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 FAN1Q9Y2M0 1017 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
UBR5-201ENST00000220959 ANGPTL3Q9Y5C1 460 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 DBNDD2Q9BQY9 259 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 FAM170AA1A519 330 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 RAPH1Q70E73 1250 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 BBS5Q8N3I7 341 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 EYA1Q99502 592 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 Q9H521 79 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
UBR5-201ENST00000220959 N4BP1O75113 896 aaKnown RBP16.31■□□□□ 0.2
UBR5-201ENST00000220959 RNF8O76064 485 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
UBR5-201ENST00000220959 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 SPECC1L-ADORA2AF8WAN1 911 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 ALAS1P13196 640 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 ATP6V1E1P36543 226 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 KAZNQ674X7 775 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 TSPYL2Q9H2G4 693 aaPredicted RBP16.31■□□□□ 0.2
UBR5-201ENST00000220959 BAIAP2L1Q9UHR4 511 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
UBR5-201ENST00000220959 KDM5BQ9UGL1 1544 aa16.3■□□□□ 0.2
UBR5-201ENST00000220959 ZNF532Q9HCE3 1301 aa16.3■□□□□ 0.2
UBR5-201ENST00000220959 PPP2R5EQ16537 467 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms