RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PCP11498 1178 aaKnown RBP20.95■□□□□ 0.94
SMPD3-201ENST00000219334 OSBPP22059 807 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 EAF2Q96CJ1 260 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-201ENST00000219334 FAM184BQ9ULE4 1060 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 PZPP20742 1482 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 FOSP01100 380 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-201ENST00000219334 GOLGA8HP0CJ92 632 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 USP14P54578 494 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 LARSQ9P2J5 1176 aaKnown RBP20.95■□□□□ 0.94
SMPD3-201ENST00000219334 MRRFQ96E11 262 aaKnown RBP20.94■□□□□ 0.94
SMPD3-201ENST00000219334 ABL1P00519 1130 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 XRCC5P13010 732 aaKnown RBP20.94■□□□□ 0.94
SMPD3-201ENST00000219334 LRMPQ12912 555 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 DNAJC21Q5F1R6 531 aaKnown RBP20.94■□□□□ 0.94
SMPD3-201ENST00000219334 AFAP1L2Q8N4X5 818 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 TIGD1Q96MW7 591 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 ZBTB1Q9Y2K1 713 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 DDAH1O94760 285 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 MYOCDQ8IZQ8 938 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 SEC24BO95487 1268 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 SCG2P13521 617 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 TECP42680 631 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 TUBB2AQ13885 445 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 MMS19Q96T76 1030 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 TUBB2BQ9BVA1 445 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 MYO1AQ9UBC5 1043 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 MKRN1Q9UHC7 482 aaKnown RBP20.94■□□□□ 0.94
SMPD3-201ENST00000219334 NPHP4O75161 1426 aaPredicted RBP20.94■□□□□ 0.94
SMPD3-201ENST00000219334 CAPN9O14815 690 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 CEP104O60308 925 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 HSPA1LP34931 641 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 TAOK1Q7L7X3 1001 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 ARMC9Q7Z3E5 817 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 IQCDQ96DY2 449 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 SWAP70Q9UH65 585 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 THRAP3Q9Y2W1 955 aaKnown RBP20.94■□□□□ 0.94
SMPD3-201ENST00000219334 PCDHA1Q9Y5I3 950 aa20.94■□□□□ 0.94
SMPD3-201ENST00000219334 POLA2Q14181 598 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 CASC4Q6P4E1 433 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 VPS52Q8N1B4 723 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 POLGP54098 1239 aaPredicted RBP20.93■□□□□ 0.94
SMPD3-201ENST00000219334 CC2D2BQ6DHV5 1058 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 K7ENM7 598 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 LGSNQ5TDP6 509 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 DDX25Q9UHL0 483 aaKnown RBP20.93■□□□□ 0.94
SMPD3-201ENST00000219334 UBE3CQ15386 1083 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 CDC37L1Q7L3B6 337 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 CMTR1Q8N1G2 835 aaKnown RBP20.93■□□□□ 0.94
SMPD3-201ENST00000219334 MAIP1Q8WWC4 291 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 HESX1Q9UBX0 185 aa20.93■□□□□ 0.94
SMPD3-201ENST00000219334 OR52Z1P0C646 297 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 HSPD1P10809 573 aaKnown RBP20.92■□□□□ 0.94
SMPD3-201ENST00000219334 MYSM1Q5VVJ2 828 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 SRGAP1Q7Z6B7 1085 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 NOSTRINQ8IVI9 506 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 FAM178BQ8IXR5 827 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 AP5M1Q9H0R1 490 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 IGBP1P78318 339 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 RSPH3Q86UC2 560 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 GTF3C6Q969F1 213 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 AMNQ9BXJ7 453 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 AFG3L2Q9Y4W6 797 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 CAPN2P17655 700 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 PPP2R3AQ06190 1150 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 SERTAD1Q9UHV2 236 aa20.92■□□□□ 0.94
SMPD3-201ENST00000219334 STAT1P42224 750 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 PHKA1P46020 1223 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 HS1BP3Q53T59 392 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 N4BP1O75113 896 aaKnown RBP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 DMP1Q13316 513 aaPredicted RBP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 CCDC93Q567U6 631 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 GPATCH4Q5T3I0 446 aaKnown RBP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 ARHGEF25Q86VW2 580 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 TMEM191BP0C7N4 346 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 PEX26Q7Z412 305 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 ABI1Q8IZP0 508 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 C1orf112Q9NSG2 853 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 MLH3Q9UHC1 1453 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 PLXNC1O60486 1568 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 LRRIQ4A6NIV6 560 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 ERCC6LQ2NKX8 1250 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 DAAM2Q86T65 1068 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 CCDC89Q8N998 374 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 TRIM31Q9BZY9 425 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 FAM207AQ9NSI2 230 aaPredicted RBP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 COL4A3BPQ9Y5P4 624 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 DNMT1P26358 1616 aaKnown RBP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 EBAG9O00559 213 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 TFDP1Q14186 410 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 RPS6KC1Q96S38 1066 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 MIS12Q9H081 205 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 NLRC4Q9NPP4 1024 aa20.91■□□□□ 0.94
SMPD3-201ENST00000219334 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMPD3-201ENST00000219334 A0A0D9SFI3 127 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 OATP04181 439 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 RPS6KA1Q15418 735 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 SND1Q7KZF4 910 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMPD3-201ENST00000219334 DBNDD1Q9H9R9 158 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 WDR17Q8IZU2 1322 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms