RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 NEDD4P46934 1319 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ZNF165P49910 485 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 BBXQ8WY36 941 aaPredicted RBP10.6□□□□□ -0.71
CCDC113-201ENST00000219299 CCDC94Q9BW85 323 aaPredicted RBP10.6□□□□□ -0.71
CCDC113-201ENST00000219299 AMNQ9BXJ7 453 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ZKSCAN5Q9Y2L8 839 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 KIF5CO60282 957 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 KIF20AO95235 890 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 SPP2Q13103 211 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ALX1Q15699 326 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 CDC42EP5Q6NZY7 148 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 SYCP3Q8IZU3 236 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 BLIDQ8IZY5 108 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ZNF609O15014 1411 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 DDX39AO00148 427 aaKnown RBP10.6□□□□□ -0.71
CCDC113-201ENST00000219299 RASSF7Q02833 373 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 PKP1Q13835 747 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 NCAPG2Q86XI2 1143 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 FBXO18Q8NFZ0 1043 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 CEP95Q96GE4 821 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
CCDC113-201ENST00000219299 CPVLQ9H3G5 476 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ANKRD26Q9UPS8 1709 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 LARGE1O95461 756 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 CXCL9Q07325 125 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 ANGEL2Q5VTE6 544 aaKnown RBP10.59□□□□□ -0.71
CCDC113-201ENST00000219299 LRP10Q7Z4F1 713 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 TSG101Q99816 390 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 CAVIN2O95810 425 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 NOLC1Q14978 699 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCDC113-201ENST00000219299 INF2Q27J81 1249 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 C12orf60Q5U649 245 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 C9orf131Q5VYM1 1079 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 APOBEC3FQ8IUX4 373 aaKnown RBP10.59□□□□□ -0.71
CCDC113-201ENST00000219299 IQUBQ8NA54 791 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 TMEM47Q9BQJ4 181 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
CCDC113-201ENST00000219299 USP14P54578 494 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 HHIPL2Q6UWX4 724 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 CYB5R4Q7L1T6 521 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 TTC14Q96N46 770 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 PIGSQ96S52 555 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 LRRC27Q9C0I9 530 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 EXOC1Q9NV70 894 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 COL14A1Q05707 1796 aaKnown RBP10.59□□□□□ -0.71
CCDC113-201ENST00000219299 DESP17661 470 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 TCERG1LQ5VWI1 586 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 ATL3Q6DD88 541 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
CCDC113-201ENST00000219299 GGA3Q9NZ52 723 aa10.59□□□□□ -0.71
CCDC113-201ENST00000219299 ZFYVE27Q5T4F4 411 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 SMAP1Q8IYB5 467 aaPredicted RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 NSUN7Q8NE18 718 aaKnown RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 CD2APQ9Y5K6 639 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 SHPRHQ149N8 1683 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 FLT1P17948 1338 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 AKR1B1P15121 316 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 STAT2P52630 851 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 NOSTRINQ8IVI9 506 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 PROM2Q8N271 834 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 ENAHQ8N8S7 591 aaPredicted RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 COA7Q96BR5 231 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 NAP1L4Q99733 375 aaKnown RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 RFX7Q2KHR2 1363 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 HSP90AA4PQ58FG1 418 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 C2orf69Q8N8R5 385 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 AIFM3Q96NN9 605 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 IL25Q9H293 177 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 MTMR6Q9Y217 621 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 GOLGA6L9A6NEM1 432 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 IFNAR1P17181 557 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 KIAA1328Q86T90 577 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 RASGRP4Q8TDF6 673 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 MYOZ2Q9NPC6 264 aa10.58□□□□□ -0.72
CCDC113-201ENST00000219299 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
CCDC113-201ENST00000219299 BRD1O95696 1058 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 EEF2P13639 858 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 CCT6AP40227 531 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 PLCD1P51178 756 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 DYDC1Q8WWB3 177 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 LRWD1Q9UFC0 647 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 GPATCH11Q8N954 259 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 LEO1Q8WVC0 666 aaPredicted RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 GPR75-ASB3A0A0A6YYF3 556 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 NOP56O00567 594 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 SNW1Q13573 536 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 NCAPH2Q6IBW4 605 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 STXBP4Q6ZWJ1 553 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 CHAMP1Q96JM3 812 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms