RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 TCHHQ07283 1943 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 MROH7-TTC4A0A0A0MT08 1334 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 FRMPD2Q68DX3 1309 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 CT47A1Q5JQC4 288 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 TMTC3Q6ZXV5 915 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 DPF2Q92785 391 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 BAZ2BQ9UIF8 2168 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 MACROD2A1Z1Q3 448 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 RPN1P04843 607 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 CASP14P31944 242 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 CHMP4BP1P59074 171 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 RBM43Q6ZSC3 357 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 MARCH10Q8NA82 808 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 CENPHQ9H3R5 247 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 NCBP1Q09161 790 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 TCP10Q12799 353 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 ALS2CR12Q96Q35 445 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 CPVLQ9H3G5 476 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 TTF2Q9UNY4 1162 aaKnown RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 LMAN1P49257 510 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 ARMCX5Q6P1M9 558 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 CTR9Q6PD62 1173 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 SLC44A5Q8NCS7 719 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 SNX29Q8TEQ0 813 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 THRAP3Q9Y2W1 955 aaKnown RBP13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 FMN2Q9NZ56 1722 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 TRAF5O00463 557 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 PHACTR2O75167 634 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 GRIN1Q05586 938 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 SPAG5Q96R06 1193 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 NAPGQ99747 312 aaPredicted RBP13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 BPIFA3Q9BQP9 254 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.86□□□□□ -0.19
TM9SF4-201ENST00000217315 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 CALCRLQ16602 461 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 NOP2P46087 812 aaKnown RBP13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 RBL2Q08999 1139 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 TRIM14Q14142 442 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 SYCP1Q15431 976 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 CNNM4Q6P4Q7 775 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 USP17L2Q6R6M4 530 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 XDHP47989 1333 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 NTSR2O95665 410 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 ADCY7P51828 1080 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
TM9SF4-201ENST00000217315 OR52Z1P0C646 297 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 SCNN1DP51172 638 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 CCZ1BP86790 482 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 CCZ1P86791 482 aaPredicted RBP13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 PCDHA4Q9UN74 947 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 RPS6KA4O75676 772 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 DCCP43146 1447 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 TBC1D22AQ8WUA7 517 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 GTPBP4Q9BZE4 634 aaKnown RBP13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 TBC1D7Q9P0N9 293 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 FBXO2Q9UK22 296 aaPredicted RBP13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 LTN1O94822 1766 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 SOWAHDA6NJG2 315 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 SPDYE3A6NKU9 549 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 TACC1O75410 805 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 COPB1P53618 953 aaKnown RBP13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 NEK8Q86SG6 692 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 NEK11Q8NG66 645 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
TM9SF4-201ENST00000217315 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.19
TM9SF4-201ENST00000217315 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.19
TM9SF4-201ENST00000217315 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.19
TM9SF4-201ENST00000217315 ERMNQ8TAM6 284 aa13.83□□□□□ -0.19
TM9SF4-201ENST00000217315 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.19
TM9SF4-201ENST00000217315 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.19
TM9SF4-201ENST00000217315 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 H7C1D1 291 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 MCM3P25205 808 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 MTA3Q9BTC8 594 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 SLC1A4P43007 532 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 DOK7Q18PE1 504 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 DPP8Q6V1X1 898 aaPredicted RBP13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 CERS3Q8IU89 383 aa13.83□□□□□ -0.2
TM9SF4-201ENST00000217315 TMCO5BA8MYB1 307 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms