RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 KRT86O43790 486 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 FGFR1OPO95684 399 aaKnown RBP10.96□□□□□ -0.65
CSTF1-201ENST00000217109 KIF5AQ12840 1032 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 MFSD14BQ5SR56 506 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 ZNF622Q969S3 477 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSTF1-201ENST00000217109 PSMB7Q99436 277 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 HINFPQ9BQA5 517 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 SEPT11Q9NVA2 429 aaKnown RBP10.96□□□□□ -0.65
CSTF1-201ENST00000217109 SALL1Q9NSC2 1324 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 TOM1O60784 492 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 PTPAQ15257 358 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 CTR9Q6PD62 1173 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 NAPGQ99747 312 aaPredicted RBP10.96□□□□□ -0.65
CSTF1-201ENST00000217109 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
CSTF1-201ENST00000217109 GDAQ9Y2T3 454 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.65
CSTF1-201ENST00000217109 STK36Q9NRP7 1315 aa10.96□□□□□ -0.65
CSTF1-201ENST00000217109 SMIM22K7EJ46 135 aa10.96□□□□□ -0.66
CSTF1-201ENST00000217109 TMTC3Q6ZXV5 915 aa10.96□□□□□ -0.66
CSTF1-201ENST00000217109 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.66
CSTF1-201ENST00000217109 GDAP1L1Q96MZ0 367 aa10.96□□□□□ -0.66
CSTF1-201ENST00000217109 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.66
CSTF1-201ENST00000217109 CEP89Q96ST8 783 aa10.96□□□□□ -0.66
CSTF1-201ENST00000217109 DCP1AQ9NPI6 582 aaPredicted RBP10.96□□□□□ -0.66
CSTF1-201ENST00000217109 TTF2Q9UNY4 1162 aaKnown RBP10.96□□□□□ -0.66
CSTF1-201ENST00000217109 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.66
CSTF1-201ENST00000217109 PAFAH1B1P43034 410 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 ITPK1Q13572 414 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 MTF1Q14872 753 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 TBC1D9BQ66K14 1250 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 GGA1Q9UJY5 639 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 SETD1AO15047 1707 aaKnown RBP10.95□□□□□ -0.66
CSTF1-201ENST00000217109 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-201ENST00000217109 HLA-DOAP06340 250 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 KRT83P78385 493 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 CUL4BQ13620 913 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 IQCEQ6IPM2 695 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 SV2BQ7L1I2 683 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 TBC1D7Q9P0N9 293 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 VPS18Q9P253 973 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 LRWD1Q9UFC0 647 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 TUBE1Q9UJT0 475 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 BICDL2A1A5D9 508 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 PLCG2P16885 1265 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 CLCN6P51797 869 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 GTF2IP78347 998 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 NTRK3Q16288 839 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 ZNF512BQ96KM6 892 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-201ENST00000217109 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-201ENST00000217109 EFCAB8A8MWE9 144 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 COPB1P53618 953 aaKnown RBP10.95□□□□□ -0.66
CSTF1-201ENST00000217109 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
CSTF1-201ENST00000217109 FMN2Q9NZ56 1722 aa10.95□□□□□ -0.66
CSTF1-201ENST00000217109 BTDP43251 543 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 MAP9Q49MG5 647 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 REXO1Q8N1G1 1221 aaKnown RBP10.94□□□□□ -0.66
CSTF1-201ENST00000217109 SRBD1Q8N5C6 995 aaKnown RBP10.94□□□□□ -0.66
CSTF1-201ENST00000217109 OR8K1Q8NGG5 319 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 PNPLA7Q6ZV29 1317 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 PP2D1A8MPX8 630 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 TRAF5O00463 557 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 ENC1O14682 589 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 FOXP4Q8IVH2 680 aaPredicted RBP10.94□□□□□ -0.66
CSTF1-201ENST00000217109 BRIP1Q9BX63 1249 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 SLC39A2Q9NP94 309 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 LTN1O94822 1766 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 NOP2P46087 812 aaKnown RBP10.94□□□□□ -0.66
CSTF1-201ENST00000217109 TOB1P50616 345 aaPredicted RBP10.94□□□□□ -0.66
CSTF1-201ENST00000217109 SLC35F6Q8N357 371 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 SNX29Q8TEQ0 813 aa10.94□□□□□ -0.66
CSTF1-201ENST00000217109 FAM208AQ9UK61 1670 aaKnown RBP10.94□□□□□ -0.66
CSTF1-201ENST00000217109 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 MARCH10Q8NA82 808 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 ALS2CR12Q96Q35 445 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 WDR24Q96S15 920 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 KLRK1P26718 216 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 TCP10Q12799 353 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 NCAPHQ15003 741 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 KRT31Q15323 416 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 KRT25Q7Z3Z0 450 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 TAF4BQ92750 862 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 NAA15Q9BXJ9 866 aaKnown RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 FAM217BQ9NTX9 383 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 CALCOCO1Q9P1Z2 691 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 TRIM49BA6NDI0 452 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 CTIFO43310 598 aaKnown RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 PCP11498 1178 aaKnown RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 FGFR2P21802 821 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 GABPB1Q06547 395 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 CLEC4GQ6UXB4 293 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 STAG2Q8N3U4 1231 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms