RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ICA1Q05084 483 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 TTLL12Q14166 644 aaPredicted RBP12.15□□□□□ -0.46
CD4-201ENST00000011653 KCTD1Q719H9 257 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 NUP88Q99567 741 aaPredicted RBP12.15□□□□□ -0.46
CD4-201ENST00000011653 NUP62CLQ9H1M0 184 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 SWAP70Q9UH65 585 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 ARFGEF1Q9Y6D6 1849 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 CDK5RAP2Q96SN8 1893 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 SLC16A2P36021 539 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
CD4-201ENST00000011653 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.47
CD4-201ENST00000011653 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.47
CD4-201ENST00000011653 INPP5BP32019 993 aa12.15□□□□□ -0.47
CD4-201ENST00000011653 ECE1P42892 770 aa12.15□□□□□ -0.47
CD4-201ENST00000011653 FMR1Q06787 632 aaKnown RBP eCLIP12.15□□□□□ -0.47
CD4-201ENST00000011653 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.47
CD4-201ENST00000011653 TROAPQ12815 778 aa12.15□□□□□ -0.47
CD4-201ENST00000011653 DCPSQ96C86 337 aaKnown RBP12.15□□□□□ -0.47
CD4-201ENST00000011653 ALG1Q9BT22 464 aa12.15□□□□□ -0.47
CD4-201ENST00000011653 SPTLC3Q9NUV7 552 aa12.15□□□□□ -0.47
CD4-201ENST00000011653 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 EPHX2P34913 555 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 GNL2Q13823 731 aaKnown RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 KRT26Q7Z3Y9 468 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 FAM200AQ8TCP9 573 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 ZKSCAN4Q969J2 545 aaPredicted RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 ZBED3Q96IU2 234 aaPredicted RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 SCAND2PQ9GZW5 306 aaPredicted RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 ZHX1Q9UKY1 873 aaPredicted RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 KCNJ14Q9UNX9 436 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 DGKZQ13574 1117 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 MTMR14Q8NCE2 650 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 ACER1Q8TDN7 264 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 FEZ1Q99689 392 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 GLIS2Q9BZE0 524 aaPredicted RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
CD4-201ENST00000011653 ROBO3Q96MS0 1386 aa12.14□□□□□ -0.47
CD4-201ENST00000011653 POLR2AP24928 1970 aaKnown RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 TTLL1O95922 423 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 SNAP25P60880 206 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 MOB2Q70IA6 237 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 WRNIP1Q96S55 665 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 SBF1O95248 1867 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 FAM83AQ86UY5 434 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
CD4-201ENST00000011653 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
CD4-201ENST00000011653 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 TNMDQ9H2S6 317 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 RRAGCQ9HB90 399 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
CD4-201ENST00000011653 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 PARP1P09874 1014 aaKnown RBP12.12□□□□□ -0.47
CD4-201ENST00000011653 LIG1P18858 919 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 EVCP57679 992 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 TYRO3Q06418 890 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 CCDC17Q96LX7 622 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 EHD4Q9H223 541 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
CD4-201ENST00000011653 PCNTO95613 3336 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 AP5Z1O43299 807 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 CDKL5O76039 1030 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 NTRK3Q16288 839 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 TEPSINQ96N21 525 aa12.12□□□□□ -0.47
CD4-201ENST00000011653 HERC5Q9UII4 1024 aaKnown RBP12.12□□□□□ -0.47
CD4-201ENST00000011653 DDX60LQ5H9U9 1706 aaKnown RBP12.12□□□□□ -0.47
CD4-201ENST00000011653 CAMK4Q16566 473 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 SPC24Q8NBT2 197 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 KIF3AQ9Y496 699 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 A0A1W2PRG0 241 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 KIF5BP33176 963 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 SLC1A4P43007 532 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 TRIM29Q14134 588 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
CD4-201ENST00000011653 SMARCC2Q8TAQ2 1214 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 GTF2F1P35269 517 aaKnown RBP eCLIP12.11□□□□□ -0.47
CD4-201ENST00000011653 SLFN13Q68D06 897 aa12.11□□□□□ -0.47
CD4-201ENST00000011653 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms