RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Pitpnm2Q6ZPQ6 1335 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 NinQ61043 2035 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mboat4P0C7A3 435 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 LeprP48356 1162 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Bace1P56818 501 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Isy1Q69ZQ2 285 aaKnown RBP8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Clca4aQ6Q473 924 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Lrrc15Q80X72 579 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tcp11l1Q8BTG3 509 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Rec8Q8C5S7 591 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 TnmdQ9EP64 317 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 AllcQ9JHX6 414 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Acot9Q9R0X4 439 aaKnown RBP8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Nova2D3YVV7 556 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gm11437Q5QR91 290 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Cdca8Q8BHX3 289 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Rasgrp4Q8BTM9 673 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Bst2Q8R2Q8 172 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Krt23Q99PS0 422 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 TbcbQ9D1E6 244 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Inpp4aQ9EPW0 939 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 IkQ9Z1M8 557 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Myh8P13542 1937 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tex13cD3YU32 604 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Lilrb3P97484 841 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 DSCC1Q14AI0 399 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Prpf4bQ61136 1007 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Hook1Q8BIL5 728 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Phf20Q8BLG0 1010 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gpcpd1Q8C0L9 675 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 C8aQ8K182 587 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 SrrtQ99MR6 875 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Iqca1Q9CUL5 857 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Telo2Q9DC40 840 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Nlrp5Q9R1M5 1163 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gm5114W4VSN8 858 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pabpc1lA2A5N3 607 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mctp1E9PV86 951 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mcm3P25206 812 aaKnown RBP8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Oxr1Q4KMM3 866 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Akap4Q60662 849 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 Znf653Q6YND2 615 aa8.57□□□□□ -1.04
Usp40-204ENSMUST00000187758 A0A0U1RNP2 1173 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Q3UJP5 209 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Sez6lQ6P1D5 963 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 PigsQ6PD26 555 aaKnown RBP8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ccdc150Q8CDI7 1110 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tmem191cQ9JJB1 302 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 B3galt4Q9Z0F0 371 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Bcorl1A2AQH4 1781 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 NynrinQ5DTZ0 1840 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 MycnP03966 462 aaKnown RBP8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Fgl2P12804 432 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Kcna1P16388 495 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 PparaP23204 468 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 NogP97466 232 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tshz1Q5DTH5 1084 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Plcg2Q8CIH5 1265 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Hs2st1Q8R3H7 356 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gmcl1Q920G9 524 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 NenfQ9CQ45 171 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mrps25Q9D125 171 aaKnown RBP8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Golgb1E9PVZ8 3238 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Frmpd4A2AFR3 1320 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Irf6P97431 467 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Sfi1Q3UZY0 1216 aaKnown RBP8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Prr7Q3V0I2 269 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Vmn1r209Q5NC97 312 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tmprss11eQ5S248 423 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Slc9a1Q61165 820 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 LRWD1Q8BUI3 648 aaKnown RBP8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Hexim1Q8R409 356 aaKnown RBP8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 CsadQ9DBE0 493 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Lmbr1Q9JIT0 490 aa8.56□□□□□ -1.04
Usp40-204ENSMUST00000187758 Phldb3E9QAF4 648 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 L1camP11627 1260 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mmp20P57748 482 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gdf10P97737 476 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gcnt1Q09324 428 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Trappc10Q3TLI0 1259 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Stxbp3Q60770 592 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Cyp7b1Q60991 507 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 IbspQ61711 324 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Zfp341Q6PGC9 846 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Slc18a1Q8R090 521 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Azi2Q9QYP6 405 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 GdaQ9R111 454 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gm43638A0A0J9YU36 694 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pramel3A2AHA7 463 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gm7903A2AWL1 463 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 AV320801A2AWL3 467 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gm15023L7MUB4 467 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 OatP29758 439 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gjb4Q02738 266 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Zfp953Q3UPV7 304 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Polr3gQ6NXY9 223 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Kctd3Q8BFX3 815 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Nod2Q8K3Z0 1020 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Dppa3Q8QZY3 150 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Nr2e3Q9QXZ7 395 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms