RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Rasal3Q8C2K5 1041 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 NktrP30415 1453 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Fbf1A2A870 1173 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Map7d1A2AJI0 846 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Itga9B8JK39 1036 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Rgl2Q61193 778 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Tekt3Q6X6Z7 490 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Mb21d2Q8C525 428 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 EpgnQ924X1 152 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 ThegQ9JMB1 375 aa11.34□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Prdm2A2A7B5 1709 aaKnown RBP11.33□□□□□ -0.59
Ctc1-202ENSMUST00000116359 Klc1O88447 541 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sema3fO88632 785 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Abl2Q4JIM5 1182 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ccdc150Q8CDI7 1110 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Rbm41Q8JZV4 413 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Arhgap18Q8K0Q5 663 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ccdc65Q8VHI7 493 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 UvssaQ9D479 717 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Slc40a1Q9JHI9 570 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sall1Q9ER74 1322 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Zbtb21E9Q444 1094 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Pafah1b1P63005 410 aaKnown RBP11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Drc1Q3USS3 753 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ift122Q6NWV3 1182 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 CntrobQ8CB62 887 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Apol10aQ8CCA5 318 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Nup133Q8R0G9 1155 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Atp6v0a4Q920R6 833 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Abcf2Q99LE6 628 aaKnown RBP11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Bicc1Q99MQ1 977 aaKnown RBP11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Itga2bQ9QUM0 1033 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Kiaa1522A2A7S8 1013 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Il7P10168 154 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Neurod6P48986 337 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Dab2P98078 766 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Cracr2aQ3UP38 310 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Kiaa0319Q5SZV5 1081 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Rhpn1Q61085 643 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Pank4Q80YV4 820 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Mmgt1Q8K273 131 aaKnown RBP11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Champ1Q8K327 802 aaKnown RBP11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 HibchQ8QZS1 385 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Lrrc2Q8VDB8 371 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Cacna2d3Q9Z1L5 1091 aa11.33□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Slfn8B1ARD8 910 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gnat1P20612 350 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ezh1P70351 747 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Pex1Q5BL07 1284 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 PapolaQ61183 739 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Vps37dQ810I0 261 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ccdc172Q810N9 267 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ugt1a8D3Z748 530 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ugt1a10E9PXN7 530 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 M6prP24668 278 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Dnm1P39053 867 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 NpeppsQ11011 920 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ddx3yQ62095 658 aaKnown RBP11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Antxr2Q6DFX2 487 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ahcyl1Q80SW1 530 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Srrm3Q80WV7 648 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ncaph2Q8BSP2 607 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gbp9Q8BTS3 619 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 TatQ8QZR1 454 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Mfap3Q922T2 349 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 1700109H08RikQ9D9C0 210 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Abt1Q9QYL7 269 aaKnown RBP11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Abca14E9Q8F8 1683 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Tmem2Q5FWI3 1383 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 VirmaA2AIV2 1811 aaKnown RBP11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gm29094F6Q785 221 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Smarcad1Q04692 1021 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Acsbg2Q2XU92 667 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Dnajc8Q6NZB0 253 aaKnown RBP11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Tmem59lQ7TNI2 337 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 SrlQ7TQ48 910 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ano2Q8CFW1 1002 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gimap6Q8K349 305 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Caap1Q8VDY9 356 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 MthfsQ9D110 203 aa11.32□□□□□ -0.6
Ctc1-202ENSMUST00000116359 MaeaQ4VC33 396 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sema4bQ62179 823 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Spty2d1Q68FG3 682 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sval3Q76I99 144 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Atad2Q8CDM1 1040 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sugp1Q8CH02 643 aaKnown RBP11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Nup58Q8R332 587 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Psmd2Q8VDM4 908 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 NptxrQ99J85 493 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Rab27aQ9ERI2 221 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Slc12a4Q9JIS8 1085 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sik3Q6P4S6 1311 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Speer4aF8VPX6 267 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ccdc157Q5SPX1 718 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Krit1Q6S5J6 736 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Map10Q8BJS7 891 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Eva1bQ8K2Y3 164 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Spata4Q8K3V1 295 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Smc6Q924W5 1097 aa11.31□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Rsrc1Q9DBU6 334 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms