RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Sept3Q9Z1S5 350 aa9.83□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tuft1O08970 390 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Rnaseh1O70338 285 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Psmd1Q3TXS7 953 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pex1Q5BL07 1284 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Epn1Q80VP1 575 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 D130040H23RikQ8BII3 405 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Map2k1P31938 393 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 SsbP32067 415 aaKnown RBP9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pla2g4aP47713 748 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tcp11Q01755 566 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Drc1Q3USS3 753 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 NfkbibQ60778 359 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Spag7Q7TNE3 227 aaKnown RBP9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Zfp446Q8C9M8 523 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Sept14Q9DA97 430 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Zbtb12Q9Z150 459 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Large1Q9Z1M7 756 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Nrxn1Q9CS84 1514 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Nlrp1aQ2LKU9 1182 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Naa15Q80UM3 865 aaKnown RBP9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tcp11l1Q8BTG3 509 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Krt23Q99PS0 422 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Zbtb43Q9DAI4 467 aa9.82□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Metap2O08663 478 aaKnown RBP9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cpsf2O35218 782 aaKnown RBP9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cyp19a1P28649 503 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tax1bp1Q3UKC1 814 aaKnown RBP9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Sco1Q5SUC9 284 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Fnbp4Q6ZQ03 1031 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ubxn10Q8BG34 277 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tcp11l2Q8K1H7 517 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Stn1Q8K2X3 378 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ubxn1Q922Y1 297 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Trap1Q9CQN1 706 aaKnown RBP9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Mst1rQ62190 1378 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Abca14E9Q8F8 1683 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Slurp2P0DP59 97 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Wee1P47810 646 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Agbl1Q09M05 972 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cct6bQ61390 531 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ehbp1Q69ZW3 1231 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 RragbQ6NTA4 374 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Krit1Q6S5J6 736 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 DlatQ8BMF4 642 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Usp33Q8R5K2 909 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pcdha7Q91Y13 937 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Atp6v0a4Q920R6 833 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Chchd3Q9CRB9 227 aaKnown RBP9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Fam217aQ9D9W6 419 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cfap70D3YVL2 1141 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gm4340L7N2C4 268 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Atp6v0a2P15920 856 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Fam228bQ497Q6 232 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 McamQ8R2Y2 648 aaKnown RBP9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 WaslQ91YD9 501 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Lonrf3Q9D4H7 753 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ccdc97Q9DBT3 340 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kank3Q9Z1P7 791 aa9.81□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Lbhd1A0A087WPA0 259 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 4930523C07RikE9Q2T4 99 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ugt1a6bK9J7B2 531 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Nkx2-3P97334 362 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Sun3Q5SS91 320 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 DbnlQ62418 436 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Sp4Q62445 782 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ugt1a6Q64435 531 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ugt1a7cQ6ZQM8 531 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ncaph2Q8BSP2 607 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 CpzQ8R4V4 654 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 4930449I24RikQ9D5E3 319 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Scn4aQ9ER60 1841 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tmem131lQ3U3D7 1597 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 ByslO54825 436 aaKnown RBP9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Prl3d1P18121 224 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 GabrdP22933 449 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 ItgadQ3V0T4 1168 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Serpinb1cQ5SV42 375 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cnga2Q62398 664 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Micall1Q8BGT6 870 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tc2nQ91XT6 489 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Srgap2Q91Z67 1071 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pdia6Q922R8 440 aaKnown RBP9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Sf3a3Q9D554 501 aaKnown RBP9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Fam84aQ9D650 292 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Parp14Q2EMV9 1817 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gm29094F6Q785 221 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Chrna5Q2MKA5 467 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Skap2Q3UND0 358 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Rint1Q8BZ36 792 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pde5aQ8CG03 865 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 DymQ8CHY3 669 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Mettl5Q8K1A0 209 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Lrrc2Q8VDB8 371 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 StrbpQ91WM1 672 aaKnown RBP9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Emilin1Q99K41 1017 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Setdb1O88974 1307 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Zfp853A0A1D5RM95 733 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 AK157302I3ITR1 129 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tex35Q14BK3 207 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms