RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Gpcpd1Q8C0L9 675 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Lonp1Q8CGK3 949 aaKnown RBP11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Tcp11l2Q8K1H7 517 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Dr1Q91WV0 176 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Dph5Q9CWQ0 281 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Eef1gQ9D8N0 437 aaKnown RBP11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Tfcp2Q9ERA0 502 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Adgrl2Q8JZZ7 1487 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Arhgef40Q3UPH7 1517 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Speer2E9Q9U2 264 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Serpini1O35684 410 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Gm1604bQ3TRG0 118 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Atf3Q60765 181 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Map3k7Q62073 579 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 TrhQ62361 256 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Ak9G3UYQ4 1894 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Lonrf2B2RT44 518 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Fnbp1Q80TY0 616 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Q8R1Y2 203 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 ApobrQ8VBT6 942 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Hps3Q91VB4 1002 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Fam213aQ9CYH2 218 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 MycnP03966 462 aaKnown RBP11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Trim80Q3V061 624 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Clec4gQ8BNX1 294 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Lrrc8cQ8R502 803 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cttnbp2nlQ99LJ0 638 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Mrps9Q9D7N3 390 aaKnown RBP11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Serpinb12Q9D7P9 423 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Magi2Q9WVQ1 1275 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Hnrnph2P70333 449 aaKnown RBP11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Atp8a1P70704 1164 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Camsap3Q80VC9 1252 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Armcx3Q8BHS6 379 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Tlcd1Q99JT6 247 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 ParvgQ9ERD8 331 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Pard3Q99NH2 1333 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cnksr1A2A9K7 700 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Gm28042B7ZCM9 1014 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cfap70D3YVL2 1141 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cyp26a1O55127 497 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Casp14O89094 257 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Sult6b1P0CC03 303 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Atp11aP98197 1187 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Trip13Q3UA06 432 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Ckap2lQ7TS74 745 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Lsm14bQ8CGC4 385 aaKnown RBP11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Mrps22Q9CXW2 359 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Gm14525B1AZA0 212 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Gm2012B1B0R1 212 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Foxp1P58462 705 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Pla2g4fQ50L41 855 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 HellsQ60848 821 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Rexo1Q7TT28 1213 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Snx14Q8BHY8 964 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Usp37Q8C0R0 979 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 C130026I21RikQ8C898 291 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Atp2a1Q8R429 994 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Dnajc3Q91YW3 504 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Tgs1Q923W1 853 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 NsmfQ99NF2 532 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Chchd3Q9CRB9 227 aaKnown RBP11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 LratQ9JI60 231 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Rabgef1Q9JM13 491 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Trpc3Q9QZC1 836 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cul1Q9WTX6 776 aa11.26□□□□□ -0.61
Lig4-201ENSMUST00000095476 Gm28360A0A087WR25 190 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Snx12O70493 165 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Lrch1P62046 709 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Ect2Q07139 913 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Serpinb6Q60854 378 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cyp7a1Q64505 503 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Usp8Q80U87 1080 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Apopt1Q9CQW7 192 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Slc13a1Q9JHI4 594 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Gm11983V9GXS8 105 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Ets1P27577 440 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Adssl1P28650 457 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Pde4dQ01063 747 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 ChukQ60680 745 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Golph3lQ8R088 285 aaKnown RBP11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Zmat2Q9CPW7 199 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Rrbp1Q99PL5 1605 aaKnown RBP11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Prr16A3KMN5 304 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Eya2O08575 532 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Flot1O08917 428 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Neurog2P70447 263 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Eya1P97767 591 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Znf830Q8R1N0 363 aaKnown RBP11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Slc8a3S4R2P9 928 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Nup62clA2AG10 272 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Maml3D4QGC2 1135 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Erich2E9Q1A6 463 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 GfapP03995 430 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Mx1P09922 631 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Ccdc138Q0VF22 680 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Ripor2Q80U16 1078 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Cabs1Q8C633 391 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 EhhadhQ9DBM2 718 aa11.25□□□□□ -0.61
Lig4-201ENSMUST00000095476 Astn2Q80Z10 1352 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 115.8 ms