RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Lrrc23O35125 340 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 ZfaP23607 742 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Dnm2P39054 870 aaKnown RBP15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Znf667Q2TL60 609 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Kctd16Q5DTY9 427 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Cd209bQ8CJ91 325 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Mfap3Q922T2 349 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Vwa3bJ9JI28 736 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Tuft1O08970 390 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Art2bO35975 289 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Parp2O88554 559 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 HdxQ14B70 692 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Gm12185Q5NCB2 835 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Krt39Q6IFX4 482 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Clic6Q8BHB9 596 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Nxf1Q99JX7 618 aaKnown RBP15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Peg3Q3URU2 1571 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Supt6hQ62383 1726 aaKnown RBP15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 InsrrQ9WTL4 1300 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Gm5936A2BG95 728 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Gm5640A3KG49 728 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Gm14525B1AZA0 212 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Gm2012B1B0R1 212 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 NeblQ0II04 452 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Basp1Q91XV3 226 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Spata31d1bE9QA57 1361 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Disp1Q3TDN0 1521 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ppfia4B8QI36 1187 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Jdp2P97875 163 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Nlrp4cQ3TKR3 982 aa15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Myef2Q8C854 591 aaKnown RBP15.33■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Fkbp3Q62446 224 aaKnown RBP15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Cep104Q80V31 926 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Dnm3Q8BZ98 863 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Cyth1Q9QX11 398 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Dach1Q9QYB2 751 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Foxo3Q9WVH4 672 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 HnrnpcQ9Z204 313 aaKnown RBP15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Cpb1B2RS76 415 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Tex14Q7M6U3 1450 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Prl3d1P18121 224 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Myo1gQ5SUA5 1024 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 NntQ61941 1086 aaKnown RBP15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 H2afzP0C0S6 128 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 RpsaP14206 295 aaKnown RBP15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Stmn1P54227 149 aaKnown RBP15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 H2afvQ3THW5 128 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Map3k12Q60700 888 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ankrd6Q69ZU8 712 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Tmem87aQ8BXN9 555 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Gpcpd1Q8C0L9 675 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Parp10Q8CIE4 960 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Rabep2Q91WG2 554 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Dnajb7Q9QYI8 312 aa15.32■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Trappc10Q3TLI0 1259 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Spdl1Q923A2 608 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Trim7Q923T7 510 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Arhgap42B2RQE8 841 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Xbp1O35426 267 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Stx2Q00262 289 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Atp6v1e2Q9D593 226 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Pck1Q9Z2V4 622 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Mei4Q8BRM6 389 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Lrrc9Q8CDN9 1456 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Map3k19E9Q3S4 1311 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Prex2Q3LAC4 1598 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Abcc6Q9R1S7 1498 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Nr1i2O54915 431 aa15.31■□□□□ 0.04
Col3a1-201ENSMUST00000087883 DohhA0A1Y7VJ29 135 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ttll7A4Q9F0 912 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Snap23O09044 210 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 IvlP48997 467 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Cep85Q8BMK0 761 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Nkiras1Q8CEC5 192 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Polr2fP61219 127 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ice2Q3UZ18 988 aaKnown RBP15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Mum1l1Q4VA55 681 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ctdspl2Q8BG15 465 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ccdc68Q8BVC4 333 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Taf5lQ91WQ5 589 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Tpcn1Q9EQJ0 817 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Xrcc5P27641 732 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Nop9Q8BMC4 636 aaKnown RBP15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Rbbp5Q8BX09 538 aaKnown RBP15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Slc30a9Q5IRJ6 567 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Asxl2Q8BZ32 1370 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Casp2P29594 452 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ncoa7Q6DFV7 943 aa15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Atp1a1Q8VDN2 1023 aaKnown RBP15.3■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Timm44O35857 452 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Foxp1P58462 705 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Nr1d1Q3UV55 615 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Tshz1Q5DTH5 1084 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Rhpn1Q61085 643 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Rassf6Q80UQ2 353 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Mylk2Q8VCR8 613 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 MlxiplQ99MZ3 864 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Lrrc7Q80TE7 1490 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Kif11Q6P9P6 1052 aa15.29■□□□□ 0.04
Col3a1-201ENSMUST00000087883 Ccdc87Q8CDL9 855 aa15.29■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms