RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 NagaQ9QWR8 415 aa16.58■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Odf2A3KGV1 830 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Card10P58660 1021 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ddx49Q4FZF3 480 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ezh2Q61188 746 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 NntQ61941 1086 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Pde1cQ64338 706 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 GphnQ8BUV3 769 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 BlmhQ8R016 455 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Slc5a4aQ9ET37 656 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gm10378F6XQQ1 160 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Rc3h1Q4VGL6 1130 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Sycp1Q62209 993 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Sh3gl2Q62420 352 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ccdc181Q80ZU5 509 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Xrcc4Q924T3 326 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Mis12Q9CY25 206 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ipo7Q9EPL8 1038 aaKnown RBP16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 ThegQ9JMB1 375 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Angptl3Q9R182 455 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Kank3Q9Z1P7 791 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 MetP16056 1379 aa16.57■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Palm3A2TJV2 734 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Cyp19a1P28649 503 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Hdac4Q6NZM9 1076 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ints5Q8CHT3 1018 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Matr3Q8K310 846 aaKnown RBP16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 BbxQ8VBW5 907 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Tob2Q9JM55 345 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Slc4a4O88343 1079 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 DSCC1Q14AI0 399 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Skap2Q3UND0 358 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Tmem63cQ8CBX0 802 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Mmgt1Q8K273 131 aaKnown RBP16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Mroh6V9GX81 722 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Myh1Q5SX40 1942 aa16.56■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Pde8bE9Q4S1 865 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 MthfslL7N466 203 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Tnni2P13412 182 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Slc30a9Q5IRJ6 567 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Cyp4f39Q8BGU0 532 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Dclk3Q8BWQ5 790 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Fermt2Q8CIB5 680 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ubac1Q8VDI7 409 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Apobec3Q99J72 440 aaKnown RBP16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Lztr1Q9CQ33 837 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 CutaQ9CQ89 177 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ndufb9Q9CQJ8 179 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Frmd7A2AD83 703 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ifnar1P33896 590 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gfpt1P47856 697 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Fam107bQ3TGF2 131 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ccdc157Q5SPX1 718 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Mybpc2Q5XKE0 1136 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Nme8Q715T0 586 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Phf8Q80TJ7 1023 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Znf131Q8K3J5 619 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Trim29Q8R2Q0 587 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Eif4enif1Q9EST3 983 aaKnown RBP16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ubxn8Q9QZ49 277 aa16.55■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Igsf9bE9PZ19 1328 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ankrd35E9Q9D8 996 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Antxr2Q6DFX2 487 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Krit1Q6S5J6 736 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Spag7Q7TNE3 227 aaKnown RBP16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 WhrnQ80VW5 918 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Rufy1Q8BIJ7 712 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Washc1Q8VDD8 475 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Eif3hQ91WK2 352 aaKnown RBP16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 LpxnQ99N69 386 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Efcc1Q9JJF6 558 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 PfasQ5SUR0 1337 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Myh2G3UW82 1942 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gm5934D3Z4U6 212 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Serpina16D3Z660 418 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Bin2D3Z6Q9 489 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 MarcksP26645 309 aaKnown RBP16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gjb4Q02738 266 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Tex11Q14AT2 947 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Q3TYL0 343 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gm12185Q5NCB2 835 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Rnf41Q8BH75 317 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gps2Q921N8 327 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Prpf3Q922U1 683 aaKnown RBP16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ndufab1Q9CR21 156 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Scrn1Q9CZC8 414 aa16.54■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Znf609Q8BZ47 1413 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 PurbO35295 324 aaKnown RBP16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Api5O35841 504 aaKnown RBP16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ppp2r5bQ6PD28 497 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Aggf1Q7TN31 711 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Abtb2Q7TQI7 1024 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Maip1Q8BHE8 291 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Q8BWG4 1187 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Eps8l1Q8R5F8 716 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 CenphQ9QYM8 241 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 A0A1Y7VML8 143 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Dennd3A2RT67 1274 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gm4307E9PZY4 289 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Vmn2r78K7N6U5 853 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms