RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ildr1Q8CBR1 537 aa16.88■□□□□ 0.29
Nup54-201ENSMUST00000038514 Spata4Q8K3V1 295 aa16.88■□□□□ 0.29
Nup54-201ENSMUST00000038514 ToporslQ9D2F8 683 aa16.88■□□□□ 0.29
Nup54-201ENSMUST00000038514 Aox3G3X982 1335 aa16.88■□□□□ 0.29
Nup54-201ENSMUST00000038514 Izumo3A6PWV3 263 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 MthfslL7N466 203 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tmtc2Q56A06 836 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Stap2Q8R0L1 411 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 AdarQ99MU3 1178 aaKnown RBP16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Zcchc17Q9ESX4 241 aaKnown RBP16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 MeiocA2AG06 965 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Pfkfb3A7UAK5 555 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Lrrc6O88978 473 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Myl3P09542 204 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Casp1P29452 402 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 1700013D24RikQ0P521 120 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ica1lQ3TY65 431 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ccdc114Q3UX62 658 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Sik1Q60670 779 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Rbm15bQ6PHZ5 887 aaKnown RBP16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Aggf1Q7TN31 711 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ccdc38Q8CDN8 563 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tmem60Q8K174 133 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Dpf1Q9QX66 387 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Dnajc7Q9QYI3 494 aa16.87■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ltbp4Q8K4G1 1666 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Arfgef1G3X9K3 1846 aaKnown RBP16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Gm4307E9PZY4 289 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Gm4312K9J7E2 289 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Psmd14O35593 310 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Dnm2P39054 870 aaKnown RBP16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ifit1bl2Q3U687 466 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Pabpc4Q6PHQ9 660 aaKnown RBP16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ccdc14Q8K2J4 934 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Vmn1r218Q8R261 298 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 RarsQ9D0I9 660 aaKnown RBP16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Mss51Q9D5Z5 446 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Mast2Q60592 1734 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 RargP18911 458 aaKnown RBP16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tcp11Q01755 566 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ehmt1Q5DW34 1296 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tmem232Q5K6N0 675 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Cnnm4Q69ZF7 771 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ccdc93Q7TQK5 629 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Zc3h6Q8BYK8 1177 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Spice1Q8C804 860 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tmem63cQ8CBX0 802 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Pspc1Q8R326 523 aaKnown RBP16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Dbndd2Q9CRD4 158 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Klhl10Q9D5V2 608 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ubxn8Q9QZ49 277 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Gpaa1Q9WTK3 621 aa16.86■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ccdc88aQ5SNZ0 1873 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Scgb2b11A0A087WR49 112 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Prr29B1ARI9 187 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Gm28042B7ZCM9 1014 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Cyp2c23E9Q5K4 494 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ube4aE9Q735 1028 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tuft1O08970 390 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Nr5a1P33242 462 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ano9P86044 747 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tubb5P99024 444 aaKnown RBP16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Cct8l1Q80YT3 562 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Apopt1Q9CQW7 192 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 PfasQ5SUR0 1337 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Lrrc4bP0C192 709 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Top1Q04750 767 aaKnown RBP16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Slc20a2Q80UP8 656 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Zdhhc14Q8BQQ1 489 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tango6Q8C3S2 1079 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Sh3bp5lQ99LH9 392 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Hsd3b7Q9EQC1 369 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 ParvgQ9ERD8 331 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Cwc15Q9JHS9 229 aaKnown RBP16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Fut8Q9WTS2 575 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Irs4Q9Z0Y7 1216 aa16.85■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ankrd63A2ARS0 390 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Herc3A6H6S0 1050 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Sema4bQ62179 823 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Q91WD4 421 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Tpcn1Q9EQJ0 817 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Foxn2E9Q7L6 429 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 HrQ61645 1182 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ttc26Q8BS45 554 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Ercc4Q9QZD4 917 aa16.84■□□□□ 0.29
Nup54-201ENSMUST00000038514 Duox1A2AQ92 1551 aa16.83■□□□□ 0.29
Nup54-201ENSMUST00000038514 Pnpla6Q3TRM4 1355 aa16.83■□□□□ 0.28
Nup54-201ENSMUST00000038514 ByslO54825 436 aaKnown RBP16.83■□□□□ 0.28
Nup54-201ENSMUST00000038514 Klra1P20937 262 aa16.83■□□□□ 0.28
Nup54-201ENSMUST00000038514 Rhbdl3P58873 404 aa16.83■□□□□ 0.28
Nup54-201ENSMUST00000038514 Gimap7Q8R379 293 aa16.83■□□□□ 0.28
Nup54-201ENSMUST00000038514 Pcdh11xF6ZNL5 1338 aa16.83■□□□□ 0.28
Nup54-201ENSMUST00000038514 Slc9a1Q61165 820 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Irak1Q62406 710 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Papd7Q6PB75 542 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Mmtag2Q99LX5 260 aaKnown RBP16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Tex13cD3YU32 604 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 SarsP26638 512 aaKnown RBP16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Smarcc1P97496 1104 aa16.82■□□□□ 0.28
Nup54-201ENSMUST00000038514 Kcnb1Q03717 857 aa16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms