RNA–Protein interactions for RNA: ENSMUST00000027035.9

Sox17-201, Transcript of Transcription factor SOX-17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sox17, Length 3,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17-201ENSMUST00000027035 Prpf40bQ80W14 870 aa16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 MtrrQ8C1A3 696 aa16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 Rab3il1Q8VDV3 383 aa16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 Nip7Q9CXK8 180 aaKnown RBP16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 Tnip1Q9WUU8 647 aa16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 Pak1O88643 545 aa16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 Pwp2Q8BU03 919 aaKnown RBP16.7■□□□□ 0.26
Sox17-201ENSMUST00000027035 Frmd7A2AD83 703 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Odf2A3KGV1 830 aaKnown RBP16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Slc12a2P55012 1205 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 VeztQ3ZK22 780 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ccnl1Q52KE7 532 aaKnown RBP16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 NntQ61941 1086 aaKnown RBP16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Phf8Q80TJ7 1023 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Hexim1Q8R409 356 aaKnown RBP16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Lrrc59Q922Q8 307 aaKnown RBP16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Bcl9Q9D219 1425 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Dennd3A2RT67 1274 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Folh1O35409 752 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Tubb4bP68372 445 aaKnown RBP16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Igbp1Q61249 340 aa16.69■□□□□ 0.26
Sox17-201ENSMUST00000027035 Palm3A2TJV2 734 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Rad23bP54728 416 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Q3TYL0 343 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Cnga2Q62398 664 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Krtap5-3Q9D226 196 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 SetQ9EQU5 289 aaKnown RBP16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Tob2Q9JM55 345 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 MetP16056 1379 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ccdc33Q3ULW6 985 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 BcrQ6PAJ1 1270 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Setdb2Q8C267 713 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 PdhbQ9D051 359 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 TbcaP48428 108 aaKnown RBP16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ccdc148Q6P5U8 527 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ube3cQ80U95 1083 aa16.68■□□□□ 0.26
Sox17-201ENSMUST00000027035 Plbd2Q3TCN2 594 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Carmil2Q3V3V9 1296 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Npdc1Q64322 332 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ufl1Q8CCJ3 793 aaKnown RBP16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Saal1Q9D2C2 474 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 FliiQ9JJ28 1271 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 NpcdF8VQB8 469 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Trim34bJ3QNR8 485 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 MycbpapQ5SUV2 932 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Atf3Q60765 181 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Nme8Q715T0 586 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Spata4Q8K3V1 295 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 E2f4Q8R0K9 410 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Hsd3b7Q9EQC1 369 aa16.67■□□□□ 0.26
Sox17-201ENSMUST00000027035 Sec24cG3X972 1096 aaKnown RBP16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Plekha7Q3UIL6 1118 aaKnown RBP16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ccdc186Q8C9S4 917 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Vmn1r218Q8R261 298 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 RarsQ9D0I9 660 aaKnown RBP16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Klc4Q9DBS5 619 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Cyp26c1B2RXA7 518 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 ErmardE9Q048 622 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Sec23aQ01405 765 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Kdm7aQ3UWM4 940 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Lrrn2Q6PHP6 730 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Pabpc4Q6PHQ9 660 aaKnown RBP16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 D130040H23RikQ8BII3 405 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 LgsnQ8CIX8 563 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Q8VDP2 222 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Trap1Q9CQN1 706 aaKnown RBP16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ndufab1Q9CR21 156 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Sipa1l3G3X9J0 1776 aa16.66■□□□□ 0.26
Sox17-201ENSMUST00000027035 Otud7bB2RUR8 840 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 E9QMW4 1145 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Gm4340L7N2C4 268 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Myl3P09542 204 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Mcm5P49718 733 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Pafah1b1P63005 410 aaKnown RBP16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Slc38a10Q5I012 1090 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Abtb2Q7TQI7 1024 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Rassf10Q8BL43 508 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Tmx4Q8C0L0 335 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Mylk2Q8VCR8 613 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Dnajc17Q91WT4 303 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Abhd2Q9QXM0 425 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Serpinb6dQ3UWK8 375 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Rnf41Q8BH75 317 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Tldc1Q8K0P3 455 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 NagaQ9QWR8 415 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Arap2Q8BZ05 1703 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Psmd14O35593 310 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 MarcksP26645 309 aaKnown RBP16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Tubb5P99024 444 aaKnown RBP16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ankrd13cQ3UX43 541 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Ttc26Q8BS45 554 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Mtfr1lQ9CWE0 289 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Plekho1Q9JIY0 408 aa16.65■□□□□ 0.26
Sox17-201ENSMUST00000027035 Spata5Q3UMC0 893 aaKnown RBP16.64■□□□□ 0.25
Sox17-201ENSMUST00000027035 Antxr2Q6DFX2 487 aa16.64■□□□□ 0.25
Sox17-201ENSMUST00000027035 Prr16A3KMN5 304 aa16.64■□□□□ 0.25
Sox17-201ENSMUST00000027035 Gucy1a2F8VQK3 730 aa16.64■□□□□ 0.25
Sox17-201ENSMUST00000027035 Vmn2r78K7N6U5 853 aa16.64■□□□□ 0.25
Sox17-201ENSMUST00000027035 Speer4dL7N216 212 aa16.64■□□□□ 0.25
Sox17-201ENSMUST00000027035 MthfslL7N466 203 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms