RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 NRXN2Q9P2S2 1712 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 GRM4Q14833 912 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 C16orf86Q6ZW13 317 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 USP49Q70CQ1 688 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 MXD3Q9BW11 206 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 ZC3H12CQ9C0D7 883 aaKnown RBP20.48■□□□□ 0.87
PHGDH-226ENST00000641756 COA1Q9GZY4 146 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 TCP11L1Q9NUJ3 509 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
PHGDH-226ENST00000641756 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 ZNF174Q15697 407 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 GPKOWQ92917 476 aaPredicted RBP eCLIP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 EYA3Q99504 573 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 TMEM47Q9BQJ4 181 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 BPIFA3Q9BQP9 254 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 PARP3Q9Y6F1 533 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 MYH1P12882 1939 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 NOLC1Q14978 699 aaKnown RBP eCLIP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 ZNF772Q68DY9 489 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 DPP8Q6V1X1 898 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 RASGRP2Q7LDG7 609 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 FOXP4Q8IVH2 680 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 PDILTQ8N807 584 aa20.47■□□□□ 0.87
PHGDH-226ENST00000641756 R3HCC1Q9Y3T6 440 aaKnown RBP20.47■□□□□ 0.87
PHGDH-226ENST00000641756 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-226ENST00000641756 CDC25BP30305 580 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 NT5C2P49902 561 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 PICALMQ13492 652 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 PIK3AP1Q6ZUJ8 805 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 CERS5Q8N5B7 392 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 ZNF579Q8NAF0 562 aaKnown RBP20.46■□□□□ 0.87
PHGDH-226ENST00000641756 ZNF287Q9HBT7 754 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 SERTAD1Q9UHV2 236 aa20.46■□□□□ 0.87
PHGDH-226ENST00000641756 PDE6BP35913 854 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 LRMPQ12912 555 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 SLC35G1Q2M3R5 365 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 TTC38Q5R3I4 469 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 MRFAP1L1Q96HT8 127 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 PCDHA5Q9Y5H7 936 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 ALDH1B1P30837 517 aa20.45■□□□□ 0.86
PHGDH-226ENST00000641756 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-226ENST00000641756 GRAMD1CQ8IYS0 662 aa20.44■□□□□ 0.86
PHGDH-226ENST00000641756 KIAA1524Q8TCG1 905 aa20.44■□□□□ 0.86
PHGDH-226ENST00000641756 ZNF622Q969S3 477 aaKnown RBP eCLIP20.44■□□□□ 0.863e-9■■■□□ 17.8
PHGDH-226ENST00000641756 PRR29P0C7W0 189 aa20.44■□□□□ 0.86
PHGDH-226ENST00000641756 NCAPHQ15003 741 aa20.44■□□□□ 0.86
PHGDH-226ENST00000641756 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
PHGDH-226ENST00000641756 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
PHGDH-226ENST00000641756 CYTH3O43739 400 aa20.43■□□□□ 0.86
PHGDH-226ENST00000641756 SCNN1DP51172 638 aa20.43■□□□□ 0.86
PHGDH-226ENST00000641756 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
PHGDH-226ENST00000641756 EPSTI1Q96J88 318 aa20.43■□□□□ 0.86
PHGDH-226ENST00000641756 CPVLQ9H3G5 476 aa20.43■□□□□ 0.86
PHGDH-226ENST00000641756 GNAQP50148 359 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 POSTNQ15063 836 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 TYW1BQ6NUM6 668 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 FLAD1Q8NFF5 587 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 G3V3G9 751 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 DNTTIP2Q5QJE6 756 aaKnown RBP20.42■□□□□ 0.86
PHGDH-226ENST00000641756 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 RASGRP4Q8TDF6 673 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 CEP95Q96GE4 821 aa20.42■□□□□ 0.86
PHGDH-226ENST00000641756 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 A0A087X0B3 334 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 PALM3A6NDB9 673 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 SMTNL1A8MU46 457 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 ACTN4O43707 911 aaKnown RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 PTGDRQ13258 359 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 BLIDQ8IZY5 108 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 SYMPKQ92797 1274 aaKnown RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 DDX4Q9NQI0 724 aaKnown RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 HOOK1Q9UJC3 728 aaKnown RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 BMP15O95972 392 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 BMP6P22004 513 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 MCM7P33993 719 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 ARID5BQ14865 1188 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 WWC2Q6AWC2 1192 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 HEATR3Q7Z4Q2 680 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 ELOA2Q8IYF1 753 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 DHX58Q96C10 678 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 SPTLC3Q9NUV7 552 aa20.41■□□□□ 0.86
PHGDH-226ENST00000641756 MORC2Q9Y6X9 1032 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-226ENST00000641756 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 VWA3AA6NCI4 1184 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 SMC2O95347 1197 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 CALML3P27482 149 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 LMOD1P29536 600 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-226ENST00000641756 ATP2C1P98194 919 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-226ENST00000641756 FILIP1Q7Z7B0 1213 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 FERMT2Q96AC1 680 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 DBNDD1Q9H9R9 158 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 MAN1B1Q9UKM7 699 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 PCDHA4Q9UN74 947 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms