RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 PAPPA2Q9BXP8 1791 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 VPS37CA5D8V6 355 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-221ENST00000641573 CDKL5O76039 1030 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 MMP14P50281 582 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 ANGEL2Q5VTE6 544 aaKnown RBP15.27■□□□□ 0.04
PHGDH-221ENST00000641573 SH3BP5LQ7L8J4 393 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 DGKHQ86XP1 1220 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 NEDD1Q8NHV4 660 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 ANKS1AQ92625 1134 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 EHD4Q9H223 541 aa15.27■□□□□ 0.04
PHGDH-221ENST00000641573 ZNF70Q9UC06 446 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-221ENST00000641573 CLRN2A0PK11 232 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 DDTLA6NHG4 134 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 PPFIA3O75145 1194 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 DDAH1O94760 285 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 F13A1P00488 732 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 CALM1P0DP23 149 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 CALM2P0DP24 149 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 CALM3P0DP25 149 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 FDPSP14324 419 aaKnown RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 ZNF280AP59817 542 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 NOM1Q5C9Z4 860 aaKnown RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 RCSD1Q6JBY9 416 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 ZSCAN29Q8IWY8 852 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 ZBED3Q96IU2 234 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
PHGDH-221ENST00000641573 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-221ENST00000641573 ASTN2O75129 1339 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-221ENST00000641573 CCDC196A0A1B0GTZ2 297 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 TCP10L2B9ZVM9 353 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 FKTNO75072 461 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 SHMT1P34896 483 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 SREBF2Q12772 1141 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-221ENST00000641573 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 NTRK3Q16288 839 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 CRACR2BQ8N4Y2 399 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-221ENST00000641573 KAT14Q9H8E8 782 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 MYOZ2Q9NPC6 264 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
PHGDH-221ENST00000641573 COL2A1P02458 1487 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-221ENST00000641573 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 DDX11L8A8MPP1 907 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 H3BQV1 296 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 MYO1BO43795 1136 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 AKR1B1P15121 316 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 IFNAR1P17181 557 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 FOSBP53539 338 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 TROAPQ12815 778 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 FOXP4Q8IVH2 680 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-221ENST00000641573 TRIM34Q9BYJ4 488 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 PLIN4Q96Q06 1357 aa15.24■□□□□ 0.03
PHGDH-221ENST00000641573 STK36Q9NRP7 1315 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 UBE2Q2LH0YL09 131 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 GOLGA6L22H0YM25 854 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 TM4SF4P48230 202 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 SSRP1Q08945 709 aaKnown RBP15.23■□□□□ 0.03
PHGDH-221ENST00000641573 FKBP1CQ5VVH2 108 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 MCTP1Q6DN14 999 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 PHKBQ93100 1093 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.23■□□□□ 0.03
PHGDH-221ENST00000641573 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 RBM28Q9NW13 759 aaKnown RBP15.23■□□□□ 0.03
PHGDH-221ENST00000641573 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
PHGDH-221ENST00000641573 PITPNM2Q9BZ72 1349 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 WNT10BO00744 389 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 FMNL1O95466 1100 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-221ENST00000641573 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 NF2P35240 595 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 FXR1P51114 621 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHGDH-221ENST00000641573 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
PHGDH-221ENST00000641573 PNMA1Q8ND90 353 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 CTCFLQ8NI51 663 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-221ENST00000641573 CEP95Q96GE4 821 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 TMEM47Q9BQJ4 181 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
PHGDH-221ENST00000641573 IGKV6D-41A0A0C4DH26 115 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 FAM196BA6NMK8 535 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 TOP1P11387 765 aaKnown RBP15.21■□□□□ 0.03
PHGDH-221ENST00000641573 PTMSP20962 102 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 NOVP48745 357 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 MKRN3Q13064 507 aaKnown RBP15.21■□□□□ 0.03
PHGDH-221ENST00000641573 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-221ENST00000641573 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-221ENST00000641573 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 NBPF11Q86T75 865 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 FERMT3Q86UX7 667 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 TRIM22Q8IYM9 498 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 CMTR1Q8N1G2 835 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms