RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 KIAA1683Q9H0B3 1180 aa10.7□□□□□ -0.7
SCARB2-225ENST00000640900 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-225ENST00000640900 KCNH4Q9UQ05 1017 aa10.7□□□□□ -0.7
SCARB2-225ENST00000640900 PTPRFP10586 1907 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 MYH4Q9Y623 1939 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 ST18O60284 1047 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 PDIA3P30101 505 aaKnown RBP10.69□□□□□ -0.7
SCARB2-225ENST00000640900 GJA5P36382 358 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 PPATQ06203 517 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 PPIL2Q13356 520 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
SCARB2-225ENST00000640900 ZNF280CQ8ND82 737 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 BRF1Q92994 677 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
SCARB2-225ENST00000640900 CLIP2Q9UDT6 1046 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 LIMCH1Q9UPQ0 1083 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
SCARB2-225ENST00000640900 TLL2Q9Y6L7 1015 aa10.69□□□□□ -0.7
SCARB2-225ENST00000640900 ERICH2A1L162 156 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 MPHOSPH10O00566 681 aaKnown RBP10.68□□□□□ -0.7
SCARB2-225ENST00000640900 CXCL11O14625 94 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 PFKFB2O60825 505 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 DDAH1O94760 285 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 BACE1P56817 501 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 APOBRQ0VD83 1088 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 ST3GAL1Q11201 340 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 CUL4AQ13619 759 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 MOGSQ13724 837 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 PRKG1Q13976 671 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 RAB3GAP1Q15042 981 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 PPP2R5BQ15173 497 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 ME3Q16798 604 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 KIAA1755Q5JYT7 1200 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 CCDC84Q86UT8 332 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-225ENST00000640900 ZNF654Q8IZM8 581 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 VCPKMTQ9H867 229 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 PICK1Q9NRD5 415 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 STX8Q9UNK0 236 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 CSADQ9Y600 493 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
SCARB2-225ENST00000640900 A0A0G2JLL6 359 aaPredicted RBP10.67□□□□□ -0.7
SCARB2-225ENST00000640900 KLF18A0A0U1RQI7 1052 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
SCARB2-225ENST00000640900 C19orf81C9J6K1 198 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 USP17L10C9JJH3 530 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 F5H6K3 240 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 PLA2G6O60733 806 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 LARGE1O95461 756 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 PDHBP11177 359 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 ECE1P42892 770 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 KLRC3Q07444 240 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 FUT2Q10981 343 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 GRM4Q14833 912 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 SLC35G1Q2M3R5 365 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 PRRT2Q7Z6L0 340 aaPredicted RBP10.67□□□□□ -0.7
SCARB2-225ENST00000640900 LPAR1Q92633 364 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 TMX3Q96JJ7 454 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 MS4A4AQ96JQ5 239 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 ZSCAN31Q96LW9 406 aaPredicted RBP10.67□□□□□ -0.7
SCARB2-225ENST00000640900 AS3MTQ9HBK9 375 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
SCARB2-225ENST00000640900 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
SCARB2-225ENST00000640900 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-225ENST00000640900 TMEM88BA6NKF7 163 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 FAM155AB1AL88 458 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-225ENST00000640900 IRF6O14896 467 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 NDUFB10O96000 172 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 CALM1P0DP23 149 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 CALM2P0DP24 149 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 CALM3P0DP25 149 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 ZBTB48P10074 688 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-225ENST00000640900 SMARCA1P28370 1054 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 ZNF543Q08ER8 600 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 SPP2Q13103 211 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 NTRK3Q16288 839 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 SPRYD7Q5W111 196 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 BTNL9Q6UXG8 535 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 CATIPQ7Z7H3 387 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 LRRC47Q8N1G4 583 aaKnown RBP10.66□□□□□ -0.7
SCARB2-225ENST00000640900 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 DCAF4Q8WV16 495 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 GTF3C6Q969F1 213 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 SLC10A4Q96EP9 437 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 WNK4Q96J92 1243 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
SCARB2-225ENST00000640900 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 KAT14Q9H8E8 782 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 ELP3Q9H9T3 547 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 MAD2L2Q9UI95 211 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 LOC285556D6RIA3 1793 aa10.66□□□□□ -0.7
SCARB2-225ENST00000640900 RLFQ13129 1914 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 CCDC69A6NI79 296 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 RASSF10A6NK89 507 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 ZBTB43O43298 467 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms