RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 LRP6O75581 1613 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 PPP1R3GB7ZBB8 358 aa18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 GYPCP04921 128 aa18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 CYP2C19P33261 490 aa18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 CHMP4BP1P59074 171 aa18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 DDB1Q16531 1140 aa18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.59
HNRNPU-228ENST00000640306 PES1O00541 588 aaKnown RBP18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 N4BP3O15049 544 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 KIF5CO60282 957 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 TPM1P09493 284 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 CCDC152Q4G0S7 254 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 TTC38Q5R3I4 469 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 EEF2KMTQ96G04 330 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 A0A0U1RQG5 324 aaPredicted RBP18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 ERVV-1B6SEH8 477 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 MFAP3LO75121 409 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 MCM6Q14566 821 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 WWC2Q6AWC2 1192 aa18.76■□□□□ 0.59
HNRNPU-228ENST00000640306 MYH3P11055 1940 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 RHOXF2BP0C7M4 288 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 FILIP1LQ4L180 1135 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 SLC35F6Q8N357 371 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 PANX2Q96RD6 677 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 RHOXF2Q9BQY4 288 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 CHD4Q14839 1912 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 XDHP47989 1333 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 FUT2Q10981 343 aa18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 FAM98CQ17RN3 349 aaKnown RBP18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.75■□□□□ 0.59
HNRNPU-228ENST00000640306 BCL9O00512 1426 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 USP17L12C9JPN9 530 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 USP17L21D6R901 530 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 HNRNPH2P55795 449 aaKnown RBP18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 KRT31Q15323 416 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 LONRF2Q1L5Z9 754 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 RABGGTAQ92696 567 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 PLIN2Q99541 437 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 NUP88Q99567 741 aaPredicted RBP18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 TXLNAP40222 546 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 CDKAL1Q5VV42 579 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 IQCA1Q86XH1 822 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 RTL9Q8NET4 1388 aa18.74■□□□□ 0.59
HNRNPU-228ENST00000640306 ATP6V1AP38606 617 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 NLRP5P59047 1200 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 SH3RF1Q7Z6J0 888 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 SRBD1Q8N5C6 995 aaKnown RBP18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 MTRQ99707 1265 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 FUT8Q9BYC5 575 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 TFR2Q9UP52 801 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 GDAQ9Y2T3 454 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 NID2Q14112 1375 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 NUP98P52948 1817 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 ERVK-24P63145 666 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 TROAPQ12815 778 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 NPY5RQ15761 445 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 C3orf67Q6ZVT6 689 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 MARCH10Q8NA82 808 aaPredicted RBP18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 RASGRP4Q8TDF6 673 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 PNKPQ96T60 521 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 BRMS1Q9HCU9 246 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 MYH2Q9UKX2 1941 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 PBX1P40424 430 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 CRKLP46109 303 aaKnown RBP18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 BICDL1Q6ZP65 573 aa18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 RIOK1Q9BRS2 568 aaKnown RBP18.73■□□□□ 0.59
HNRNPU-228ENST00000640306 H3BQF6 201 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 CYP2D6P10635 497 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 EIF5P55010 431 aaKnown RBP18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 IL17AQ16552 155 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 SRGAP1Q7Z6B7 1085 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 GSDMAQ96QA5 445 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 TRIM10Q9UDY6 481 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 TRIM49BA6NDI0 452 aa18.72■□□□□ 0.59
HNRNPU-228ENST00000640306 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
HNRNPU-228ENST00000640306 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
HNRNPU-228ENST00000640306 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
HNRNPU-228ENST00000640306 ANKZF1Q9H8Y5 726 aa18.71■□□□□ 0.59
HNRNPU-228ENST00000640306 KLRK1P26718 216 aa18.71■□□□□ 0.59
HNRNPU-228ENST00000640306 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.598e-7■□□□□ 10.3
HNRNPU-228ENST00000640306 CDC23Q9UJX2 597 aa18.71■□□□□ 0.59
HNRNPU-228ENST00000640306 TAF3Q5VWG9 929 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CTR9Q6PD62 1173 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 TMTC3Q6ZXV5 915 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 RASSF8Q8NHQ8 419 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CERKQ8TCT0 537 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 NELFBQ8WX92 580 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 ZFP91Q96JP5 570 aaPredicted RBP18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CTAGE1Q96RT6 745 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CHP1Q99653 195 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms