RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 HIBADHP31937 336 aaKnown RBP14.05□□□□□ -0.16
SPIN3-236ENST00000640131 IRX1P78414 480 aaPredicted RBP14.05□□□□□ -0.16
SPIN3-236ENST00000640131 IQCB1Q15051 598 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 DIXDC1Q155Q3 683 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 GRIK5Q16478 980 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 EFCAB13Q8IY85 973 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 PDILTQ8N807 584 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 FAM210AQ96ND0 272 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 POLR3EQ9NVU0 708 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 PNPLA7Q6ZV29 1317 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 LAMB2P55268 1798 aa14.05□□□□□ -0.16
SPIN3-236ENST00000640131 FOXN1O15353 648 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 SGMS1Q86VZ5 419 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 ZNF804BA4D1E1 1349 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 WDR19Q8NEZ3 1342 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 CTAGE5O15320 804 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 SEC31AO94979 1220 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 IPO7O95373 1038 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 GNAT2P19087 354 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 PNOCQ13519 176 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 JAKMIP3Q5VZ66 844 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 SHC4Q6S5L8 630 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 TADA2BQ86TJ2 420 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 ENAHQ8N8S7 591 aaPredicted RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 PRPF38AQ8NAV1 312 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 LIFRP42702 1097 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 DHX40Q8IX18 779 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 TDRD7Q8NHU6 1098 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 NSUN4Q96CB9 384 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 NUCKS1Q9H1E3 243 aaKnown RBP14.04□□□□□ -0.16
SPIN3-236ENST00000640131 LRRC4BQ9NT99 713 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 IRAK4Q9NWZ3 460 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 RPS6KL1Q9Y6S9 549 aa14.04□□□□□ -0.16
SPIN3-236ENST00000640131 MYH6P13533 1939 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 CACNA1SQ13698 1873 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 USP27XA6NNY8 438 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 CAND2O75155 1236 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 SLC3A2P08195 630 aaKnown RBP14.03□□□□□ -0.16
SPIN3-236ENST00000640131 USP17L8P0C7I0 530 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 TRIM22Q8IYM9 498 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 ESR2Q92731 530 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 CNTNAP4Q9C0A0 1308 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 RTL9Q8NET4 1388 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
SPIN3-236ENST00000640131 YEATS4O95619 227 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
SPIN3-236ENST00000640131 GRAMD1CQ8IYS0 662 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 SRRTQ9BXP5 876 aaKnown RBP14.03□□□□□ -0.16
SPIN3-236ENST00000640131 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
SPIN3-236ENST00000640131 ANKRD33BA6NCL7 494 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 C21orf2O43822 256 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 PAX7P23759 505 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 SYKP43405 635 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 SLC39A14Q15043 492 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 NYAP1Q6ZVC0 841 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.16
SPIN3-236ENST00000640131 DYNLL2Q96FJ2 89 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 PAIP2Q9BPZ3 127 aaKnown RBP14.02□□□□□ -0.16
SPIN3-236ENST00000640131 CABP5Q9NP86 173 aa14.02□□□□□ -0.16
SPIN3-236ENST00000640131 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.16
SPIN3-236ENST00000640131 RREB1Q92766 1687 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 ATP8B1O43520 1251 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 VEGFAP15692 232 aaPredicted RBP14.02□□□□□ -0.17
SPIN3-236ENST00000640131 USP8P40818 1118 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 GBP6Q6ZN66 633 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 LRRN4CLQ8ND94 238 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 CACTINQ8WUQ7 758 aaKnown RBP14.02□□□□□ -0.17
SPIN3-236ENST00000640131 NYXQ9GZU5 481 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 RNF41Q9H4P4 317 aaPredicted RBP14.02□□□□□ -0.17
SPIN3-236ENST00000640131 ANO10Q9NW15 660 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 KIAA1468Q9P260 1216 aa14.02□□□□□ -0.17
SPIN3-236ENST00000640131 A0A1B0GUL6 1792 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 IFNAR1P17181 557 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 TOB1P50616 345 aaPredicted RBP14.01□□□□□ -0.17
SPIN3-236ENST00000640131 EARS2Q5JPH6 523 aaKnown RBP14.01□□□□□ -0.17
SPIN3-236ENST00000640131 TRAPPC3LQ5T215 181 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 ATL3Q6DD88 541 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 PLA2G4DQ86XP0 818 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 CRACR2BQ8N4Y2 399 aaPredicted RBP14.01□□□□□ -0.17
SPIN3-236ENST00000640131 PIK3R5Q8WYR1 880 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
SPIN3-236ENST00000640131 MCM9Q9NXL9 1143 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 SAP30BPQ9UHR5 308 aaKnown RBP14.01□□□□□ -0.17
SPIN3-236ENST00000640131 UTRNP46939 3433 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
SPIN3-236ENST00000640131 PTPAQ15257 358 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 USP49Q70CQ1 688 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 FBXO33Q7Z6M2 555 aa14.01□□□□□ -0.17
SPIN3-236ENST00000640131 NOSTRINQ8IVI9 506 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms