RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 ELNP15502 786 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 GNAT2P19087 354 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 VCAM1P19320 739 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 ADD2P35612 726 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 GABPAQ06546 454 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 GPR142Q7Z601 462 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
TRIO-225ENST00000639876 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
TRIO-225ENST00000639876 GJD2Q9UKL4 321 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 SYNPO2Q9UMS6 1093 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
TRIO-225ENST00000639876 MYH8P13535 1937 aa11.31□□□□□ -0.6
TRIO-225ENST00000639876 ZNF236Q9UL36 1845 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 MAP2K5Q13163 448 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 AAMPQ13685 434 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 GSE1Q14687 1217 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 COG2Q14746 738 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 MAP3K21Q5TCX8 1036 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
TRIO-225ENST00000639876 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.3□□□□□ -0.6
TRIO-225ENST00000639876 MYH7P12883 1935 aa11.3□□□□□ -0.6
TRIO-225ENST00000639876 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
TRIO-225ENST00000639876 WDR46O15213 610 aaKnown RBP11.29□□□□□ -0.6
TRIO-225ENST00000639876 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
TRIO-225ENST00000639876 HOXC6P09630 235 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 SHMT1P34896 483 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 ICA1Q05084 483 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
TRIO-225ENST00000639876 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 MROH8Q9H579 483 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 ECHDC1Q9NTX5 307 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
TRIO-225ENST00000639876 H0YGN5 161 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 SLC25A27O95847 323 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 MORN1Q5T089 497 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 EDC3Q96F86 508 aaKnown RBP11.28□□□□□ -0.6
TRIO-225ENST00000639876 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
TRIO-225ENST00000639876 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 NRBP1Q9UHY1 535 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 TTC41PQ6P2S7 1318 aa11.28□□□□□ -0.6
TRIO-225ENST00000639876 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
TRIO-225ENST00000639876 APBB1O00213 710 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 MBD4O95243 580 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
TRIO-225ENST00000639876 CYP2B6P20813 491 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 PTPREP23469 700 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 PLCD1P51178 756 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 GRB14Q14449 540 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 C16orf86Q6ZW13 317 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 TRIB2Q92519 343 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 USP6NLQ92738 828 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 NACAP1Q9BZK3 213 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 BOLA2Q9H3K6 86 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
TRIO-225ENST00000639876 HTTP42858 3142 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
TRIO-225ENST00000639876 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 FDX1P10109 184 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 SEPT2Q15019 361 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
TRIO-225ENST00000639876 SBK1Q52WX2 424 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 SDR42E1Q8WUS8 393 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 APPBP2Q92624 585 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
TRIO-225ENST00000639876 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 SLC4A4Q9Y6R1 1079 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 ROBO3Q96MS0 1386 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
TRIO-225ENST00000639876 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 FLOT1O75955 427 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 BMP8BP34820 402 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRIO-225ENST00000639876 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 MSL3Q8N5Y2 521 aaKnown RBP11.25□□□□□ -0.61
TRIO-225ENST00000639876 ARRDC4Q8NCT1 418 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 PORCNQ9H237 461 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 DCTPP1Q9H773 170 aa11.25□□□□□ -0.61
TRIO-225ENST00000639876 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms