RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 C1QTNF9P0C862 333 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 PLCG1P19174 1290 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
ATM-228ENST00000639240 MPP2Q14168 576 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 TMEM67Q5HYA8 995 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 LCNL1Q6ZST4 164 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 SYDE1Q6ZW31 735 aaPredicted RBP5.35□□□□□ -1.55
ATM-228ENST00000639240 TTC6Q86TZ1 520 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 USP48Q86UV5 1035 aa5.35□□□□□ -1.55
ATM-228ENST00000639240 BHLHE22Q8NFJ8 381 aaPredicted RBP5.35□□□□□ -1.55
ATM-228ENST00000639240 POLR3KQ9Y2Y1 108 aaPredicted RBP5.35□□□□□ -1.55
ATM-228ENST00000639240 ROBO2Q9HCK4 1378 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 TPP2P29144 1249 aaPredicted RBP5.34□□□□□ -1.55
ATM-228ENST00000639240 CWF19L2Q2TBE0 894 aaKnown RBP5.34□□□□□ -1.55
ATM-228ENST00000639240 ZNF394Q53GI3 561 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 ZNF746Q6NUN9 644 aaPredicted RBP5.34□□□□□ -1.55
ATM-228ENST00000639240 REC114Q7Z4M0 266 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.55
ATM-228ENST00000639240 ZNF428Q96B54 188 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 DIRC2Q96SL1 478 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 SLC38A3Q99624 504 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 KCNQ5Q9NR82 932 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 UBP1Q9NZI7 540 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 EBF1Q9UH73 591 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 ADAM30Q9UKF2 790 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 PCDHGB7Q9Y5F8 929 aa5.34□□□□□ -1.55
ATM-228ENST00000639240 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 TSPAN15O95858 294 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 CYP7A1P22680 504 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 CRKP46108 304 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 HK2P52789 917 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 PKN1Q16512 942 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 TIGD5Q53EQ6 642 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 TMEM201Q5SNT2 666 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 C9orf131Q5VYM1 1079 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 MPZL3Q6UWV2 235 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 CREG2Q8IUH2 290 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 KIAA0825Q8IV33 1275 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 DTWD2Q8NBA8 298 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 COX4I2Q96KJ9 171 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 SPON2Q9BUD6 331 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 NSUN3Q9H649 340 aaKnown RBP5.33□□□□□ -1.56
ATM-228ENST00000639240 BRMS1Q9HCU9 246 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 TMEM59LQ9UK28 342 aa5.33□□□□□ -1.56
ATM-228ENST00000639240 PRR36Q9H6K5 1346 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 SHISA3A0PJX4 238 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 HTR3BO95264 441 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 HPXP02790 462 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 RAP1GAPP47736 663 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 RACK1P63244 317 aaKnown RBP5.32□□□□□ -1.56
ATM-228ENST00000639240 APOBRQ0VD83 1088 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 SEZ6Q53EL9 994 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 TMPRSS7Q7RTY8 843 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 FAM13CQ8NE31 585 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 ABHD4Q8TB40 342 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 BAHD1Q8TBE0 780 aaPredicted RBP5.32□□□□□ -1.56
ATM-228ENST00000639240 CYB5D2Q8WUJ1 264 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 VWCEQ96DN2 955 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 LRRC3Q9BY71 257 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 GPR62Q9BZJ7 368 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 C19orf44Q9H6X5 657 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 REV1Q9UBZ9 1251 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 KLHL3Q9UH77 587 aa5.32□□□□□ -1.56
ATM-228ENST00000639240 DDX41Q9UJV9 622 aaKnown RBP5.32□□□□□ -1.56
ATM-228ENST00000639240 EFEMP2O95967 443 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 ZGLP1P0C6A0 271 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 MCM4P33991 863 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 ETV3P41162 512 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 RBM25P49756 843 aaKnown RBP5.31□□□□□ -1.56
ATM-228ENST00000639240 HDLBPQ00341 1268 aaKnown RBP5.31□□□□□ -1.56
ATM-228ENST00000639240 TSPYL5Q86VY4 417 aaPredicted RBP5.31□□□□□ -1.56
ATM-228ENST00000639240 METTL16Q86W50 562 aaKnown RBP5.31□□□□□ -1.56
ATM-228ENST00000639240 NKD1Q969G9 470 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 EAF1Q96JC9 268 aaPredicted RBP5.31□□□□□ -1.56
ATM-228ENST00000639240 NT5C1AQ9BXI3 368 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
ATM-228ENST00000639240 YARSP54577 528 aaKnown RBP5.3□□□□□ -1.56
ATM-228ENST00000639240 MLECQ14165 292 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 GK5Q6ZS86 529 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 NT5DC4Q86YG4 428 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 SLFN12Q8IYM2 578 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 MYLIPQ8WY64 445 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 RNF32Q9H0A6 362 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 PCDHA11Q9Y5I1 949 aa5.3□□□□□ -1.56
ATM-228ENST00000639240 CLCQ05315 142 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 EGR3Q06889 387 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 LRRC56Q8IYG6 542 aaPredicted RBP5.29□□□□□ -1.56
ATM-228ENST00000639240 ZNF654Q8IZM8 581 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 FBXO15Q8NCQ5 510 aaPredicted RBP5.29□□□□□ -1.56
ATM-228ENST00000639240 RNF141Q8WVD5 230 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 CD320Q9NPF0 282 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 DUSP13Q9UII6 198 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 ZNF281Q9Y2X9 895 aa5.29□□□□□ -1.56
ATM-228ENST00000639240 SLC22A31A6NKX4 558 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 NOTOA8MTQ0 251 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 ETV2O00321 342 aaPredicted RBP5.28□□□□□ -1.56
ATM-228ENST00000639240 ATE1O95260 518 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 ZNF165P49910 485 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 GALK1P51570 392 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 SLITRK4Q8IW52 837 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms