RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
GFAP-228ENST00000638488 DRP2Q13474 957 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 DSCC1Q9BVC3 393 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 GGA2Q9UJY4 613 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
GFAP-228ENST00000638488 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 E7EWF7 191 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 AGPSO00116 658 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 KCNQ2O43526 872 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 MCAMP43121 646 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 SLC8A3P57103 927 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 CCDC87Q9NVE4 849 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 SALL1Q9NSC2 1324 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 LRP6O75581 1613 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 SIK1P57059 783 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 AP1ARQ63HQ0 302 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 ARMC2Q8NEN0 867 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 ITFG2Q969R8 447 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 ATP6V0A4Q9HBG4 840 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 SH3BP1Q9Y3L3 701 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 NDUFAB1O14561 156 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 SPTLC2O15270 562 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 EZRP15311 586 aaKnown RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 CLNS1AP54105 237 aaKnown RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 AMPD2Q01433 879 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 ITPK1Q13572 414 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 CCDC40Q4G0X9 1142 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 TTC19Q6DKK2 380 aaPredicted RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 INTS5Q6P9B9 1019 aaKnown RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 SLC35F6Q8N357 371 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 ZNF483Q8TF39 744 aaPredicted RBP13.64□□□□□ -0.23
GFAP-228ENST00000638488 TATDN2Q93075 761 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
GFAP-228ENST00000638488 GOLGA6BA6NDN3 693 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 TLDC1Q6P9B6 456 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
GFAP-228ENST00000638488 RIN2Q8WYP3 895 aaPredicted RBP13.63□□□□□ -0.23
GFAP-228ENST00000638488 SEC31BQ9NQW1 1179 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 SPATS2LQ9NUQ6 558 aaKnown RBP13.63□□□□□ -0.23
GFAP-228ENST00000638488 ETAA1Q9NY74 926 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 MYO6Q9UM54 1294 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 CTDNEP1O95476 244 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 PFKFB1P16118 471 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 CDR1P51861 262 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 MTF1Q14872 753 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
GFAP-228ENST00000638488 CALR3Q96L12 384 aaKnown RBP13.63□□□□□ -0.23
GFAP-228ENST00000638488 FAM210AQ96ND0 272 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
GFAP-228ENST00000638488 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
GFAP-228ENST00000638488 SOWAHDA6NJG2 315 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 PDE8BO95263 885 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 EPB41P11171 864 aaKnown RBP13.62□□□□□ -0.23
GFAP-228ENST00000638488 PHKA1P46020 1223 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
GFAP-228ENST00000638488 SNCBQ16143 134 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.62□□□□□ -0.23
GFAP-228ENST00000638488 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
GFAP-228ENST00000638488 NUP98P52948 1817 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 ZNF18P17022 549 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 FAM43BQ6ZT52 329 aaPredicted RBP13.62□□□□□ -0.23
GFAP-228ENST00000638488 NBPF5PQ86XG9 351 aaPredicted RBP13.62□□□□□ -0.23
GFAP-228ENST00000638488 MAB21L3Q8N8X9 362 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 NIP7Q9Y221 180 aaKnown RBP eCLIP13.62□□□□□ -0.23
GFAP-228ENST00000638488 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
GFAP-228ENST00000638488 OPA1O60313 960 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 CCNHP51946 323 aaPredicted RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 SELENOOQ9BVL4 669 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 EHD4Q9H223 541 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 BATF3Q9NR55 127 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 GPAA1O43292 621 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 FECHP22830 423 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 SLC8A1P32418 973 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 CCDC102BQ68D86 513 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 APPBP2Q92624 585 aa13.61□□□□□ -0.23
GFAP-228ENST00000638488 ACTR5Q9H9F9 607 aaPredicted RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 DDX20Q9UHI6 824 aaKnown RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms