RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 BICD2Q8TD16 824 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 TMEM47Q9BQJ4 181 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 MTFR1LQ9H019 292 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
ATM-226ENST00000638443 DNAJC18Q9H819 358 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
ATM-226ENST00000638443 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
ATM-226ENST00000638443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.43□□□□□ -0.58
ATM-226ENST00000638443 CCDC196A0A1B0GTZ2 297 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
ATM-226ENST00000638443 NR1I2O75469 434 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 CAMK4Q16566 473 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 DIS3L2Q8IYB7 885 aaKnown RBP11.43□□□□□ -0.58
ATM-226ENST00000638443 SUPT20HQ8NEM7 779 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
ATM-226ENST00000638443 RNF26Q9BY78 433 aaPredicted RBP11.43□□□□□ -0.58
ATM-226ENST00000638443 RBSNQ9H1K0 784 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 GOLPH3LQ9H4A5 285 aa11.43□□□□□ -0.58
ATM-226ENST00000638443 MMP1P03956 469 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 CCDC183Q5T5S1 534 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 LRSAM1Q6UWE0 723 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 ZNF662Q6ZS27 426 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 SH3BP5LQ7L8J4 393 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 RNF214Q8ND24 703 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 PRMT6Q96LA8 375 aaPredicted RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 DRC1Q96MC2 740 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 DACT1Q9NYF0 836 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 BAZ2BQ9UIF8 2168 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 CFAP45Q9UL16 551 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 SHTN1A0MZ66 631 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 MAFGO15525 162 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 SHMT1P34896 483 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 TRIM29Q14134 588 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 EARS2Q5JPH6 523 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 DGKHQ86XP1 1220 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 RTKN2Q8IZC4 609 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 ZNF396Q96N95 335 aaPredicted RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 SERPINB13Q9UIV8 391 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 MYH6P13533 1939 aa11.42□□□□□ -0.58
ATM-226ENST00000638443 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
ATM-226ENST00000638443 CLRN2A0PK11 232 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 CALM1P0DP23 149 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 CALM2P0DP24 149 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 CALM3P0DP25 149 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 POLD1P28340 1107 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 ME1P48163 572 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 BRAPQ7Z569 592 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 LINC00301Q8NCQ3 95 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 NEDD1Q8NHV4 660 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 GPKOWQ92917 476 aaPredicted RBP eCLIP11.41□□□□□ -0.58
ATM-226ENST00000638443 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 PCDHA7Q9UN72 937 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 PPME1Q9Y570 386 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 PSME4Q14997 1843 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 NFKBIEO00221 500 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 CYTH3O43739 400 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 U2AF2P26368 475 aaKnown RBP eCLIP11.41□□□□□ -0.581e-8■□□□□ 10.6
ATM-226ENST00000638443 MARCKSP29966 332 aaPredicted RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 MRE11P49959 708 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 SF3A1Q15459 793 aaKnown RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 L1TD1Q5T7N2 865 aaKnown RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
ATM-226ENST00000638443 SYAP1Q96A49 352 aaPredicted RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 RTEL1Q9NZ71 1219 aa11.41□□□□□ -0.58
ATM-226ENST00000638443 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
ATM-226ENST00000638443 RBM47A0AV96 593 aaKnown RBP11.4□□□□□ -0.58
ATM-226ENST00000638443 WNT7AO00755 349 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.58
ATM-226ENST00000638443 AKAP17AQ02040 695 aaKnown RBP11.4□□□□□ -0.58
ATM-226ENST00000638443 RASSF7Q02833 373 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 GRM4Q14833 912 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 STK38Q15208 465 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 NPY5RQ15761 445 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 ANO1Q5XXA6 986 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
ATM-226ENST00000638443 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
ATM-226ENST00000638443 ZSCAN29Q8IWY8 852 aaPredicted RBP11.4□□□□□ -0.58
ATM-226ENST00000638443 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 WASF1Q92558 559 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 MRRFQ96E11 262 aaKnown RBP11.4□□□□□ -0.58
ATM-226ENST00000638443 POLR3EQ9NVU0 708 aa11.4□□□□□ -0.58
ATM-226ENST00000638443 BCS1LQ9Y276 419 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms