RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 HMGB1P09429 215 aaKnown RBP22.83■■□□□ 1.25
HLA-A-209ENST00000638375 CETPP11597 493 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 CASTP20810 708 aaKnown RBP22.83■■□□□ 1.25
HLA-A-209ENST00000638375 RBM25P49756 843 aaKnown RBP22.83■■□□□ 1.25
HLA-A-209ENST00000638375 USP14P54578 494 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 BLOC1S2Q6QNY1 142 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 IGDCC4Q8TDY8 1250 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 C12orf42Q96LP6 360 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 LRRC2Q9BYS8 371 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 TM6SF1Q9BZW5 370 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 SH2D4AQ9H788 454 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 UPF2Q9HAU5 1272 aaKnown RBP22.83■■□□□ 1.25
HLA-A-209ENST00000638375 SENP2Q9HC62 589 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 ZSWIM6Q9HCJ5 1215 aa22.83■■□□□ 1.25
HLA-A-209ENST00000638375 WDR19Q8NEZ3 1342 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 TOP1P11387 765 aaKnown RBP22.82■■□□□ 1.24
HLA-A-209ENST00000638375 RPS6KB1P23443 525 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 GADL1Q6ZQY3 521 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 PTPN18Q99952 460 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 MTA3Q9BTC8 594 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 VCPKMTQ9H867 229 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 SYNPO2Q9UMS6 1093 aa22.82■■□□□ 1.24
HLA-A-209ENST00000638375 MYH4Q9Y623 1939 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 SH2B2O14492 632 aaPredicted RBP22.81■■□□□ 1.24
HLA-A-209ENST00000638375 MAP2K2P36507 400 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 TMEM67Q5HYA8 995 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 GPAT2Q6NUI2 795 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 TMEM87BQ96K49 555 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 KIF2CQ99661 725 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 TMOD4Q9NZQ9 345 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 LOC285556D6RIA3 1793 aa22.81■■□□□ 1.24
HLA-A-209ENST00000638375 IGF2BP3O00425 579 aaKnown RBP eCLIP22.8■■□□□ 1.24
HLA-A-209ENST00000638375 SREBF2Q12772 1141 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 WTAPQ15007 396 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 SART3Q15020 963 aaKnown RBP22.8■■□□□ 1.24
HLA-A-209ENST00000638375 TREML2Q5T2D2 321 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 IFIT1BQ5T764 474 aaKnown RBP22.8■■□□□ 1.24
HLA-A-209ENST00000638375 RUFY3Q7L099 469 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 FASTKD5Q7L8L6 764 aaKnown RBP22.8■■□□□ 1.24
HLA-A-209ENST00000638375 SPICE1Q8N0Z3 855 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 PROCA1Q8NCQ7 364 aaPredicted RBP22.8■■□□□ 1.24
HLA-A-209ENST00000638375 GMCL1P1Q8NEA9 526 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 TBC1D32Q96NH3 1257 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 UPF3BQ9BZI7 483 aaKnown RBP22.8■■□□□ 1.24
HLA-A-209ENST00000638375 LY9Q9HBG7 655 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 GOPCQ9HD26 462 aa22.8■■□□□ 1.24
HLA-A-209ENST00000638375 ERICH2A1L162 156 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 BTBD19C9JJ37 291 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 F5H6K3 240 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 NDUFB10O96000 172 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 VCAM1P19320 739 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 TM4SF4P48230 202 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 KLRC3Q07444 240 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 RASGRP2Q7LDG7 609 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 FAM43AQ8N2R8 423 aa22.79■■□□□ 1.24
HLA-A-209ENST00000638375 RAD21O60216 631 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 INHBEP58166 350 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 SLFN13Q68D06 897 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 LPAR1Q92633 364 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 KAT14Q9H8E8 782 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 AGTPBP1Q9UPW5 1226 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 CYP46A1Q9Y6A2 500 aa22.78■■□□□ 1.24
HLA-A-209ENST00000638375 LIFRP42702 1097 aa22.77■■□□□ 1.24
HLA-A-209ENST00000638375 Q6ZUG5 572 aa22.77■■□□□ 1.24
HLA-A-209ENST00000638375 ANKRD23Q86SG2 305 aa22.77■■□□□ 1.24
HLA-A-209ENST00000638375 IFNL1Q8IU54 200 aa22.77■■□□□ 1.24
HLA-A-209ENST00000638375 PNMA1Q8ND90 353 aa22.77■■□□□ 1.24
HLA-A-209ENST00000638375 MTMR7Q9Y216 660 aa22.77■■□□□ 1.24
HLA-A-209ENST00000638375 WDR46O15213 610 aaKnown RBP22.76■■□□□ 1.23
HLA-A-209ENST00000638375 REM2Q8IYK8 340 aaPredicted RBP22.76■■□□□ 1.23
HLA-A-209ENST00000638375 CHMP4CQ96CF2 233 aa22.76■■□□□ 1.23
HLA-A-209ENST00000638375 NUP88Q99567 741 aaPredicted RBP22.76■■□□□ 1.23
HLA-A-209ENST00000638375 FAM83BQ5T0W9 1011 aa22.75■■□□□ 1.23
HLA-A-209ENST00000638375 SGMS1Q86VZ5 419 aa22.75■■□□□ 1.23
HLA-A-209ENST00000638375 GMCL1Q96IK5 515 aa22.75■■□□□ 1.23
HLA-A-209ENST00000638375 AGXT2Q9BYV1 514 aa22.75■■□□□ 1.23
HLA-A-209ENST00000638375 RPAP3Q9H6T3 665 aaPredicted RBP22.75■■□□□ 1.23
HLA-A-209ENST00000638375 PDHXO00330 501 aa22.74■■□□□ 1.23
HLA-A-209ENST00000638375 SNHG28P0DPA3 235 aa22.74■■□□□ 1.23
HLA-A-209ENST00000638375 PDHBP11177 359 aa22.74■■□□□ 1.23
HLA-A-209ENST00000638375 HOXA7P31268 230 aaPredicted RBP22.74■■□□□ 1.23
HLA-A-209ENST00000638375 FBXL16Q8N461 479 aa22.74■■□□□ 1.23
HLA-A-209ENST00000638375 PDRG1Q9NUG6 133 aa22.74■■□□□ 1.23
HLA-A-209ENST00000638375 SLC45A1Q9Y2W3 748 aa22.74■■□□□ 1.23
HLA-A-209ENST00000638375 TOB2Q14106 344 aaPredicted RBP22.73■■□□□ 1.23
HLA-A-209ENST00000638375 NFXL1Q6ZNB6 911 aa22.73■■□□□ 1.23
HLA-A-209ENST00000638375 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
HLA-A-209ENST00000638375 ZNF654Q8IZM8 581 aa22.73■■□□□ 1.23
HLA-A-209ENST00000638375 TMTC2Q8N394 836 aa22.73■■□□□ 1.23
HLA-A-209ENST00000638375 DCAF4Q8WV16 495 aa22.73■■□□□ 1.23
HLA-A-209ENST00000638375 BRF1Q92994 677 aa22.73■■□□□ 1.23
HLA-A-209ENST00000638375 CCDC69A6NI79 296 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L15C9J2P7 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L13C9JLJ4 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L11C9JVI0 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L18D6R9N7 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L17D6RBQ6 530 aa22.72■■□□□ 1.23
HLA-A-209ENST00000638375 USP17L19D6RCP7 530 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms