RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 NYAP2Q9P242 653 aa24.5■■□□□ 1.51
CLN8-213ENST00000637156 ZC3H4Q9UPT8 1303 aaKnown RBP24.5■■□□□ 1.51
CLN8-213ENST00000637156 PALM3A6NDB9 673 aaPredicted RBP24.49■■□□□ 1.51
CLN8-213ENST00000637156 PHF20L1A8MW92 1017 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 KIF5BP33176 963 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 CABP5Q9NP86 173 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 H3BQV1 296 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 BAG4O95429 457 aaKnown RBP24.49■■□□□ 1.51
CLN8-213ENST00000637156 ATP2B2Q01814 1243 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 IFFO2Q5TF58 517 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 OTUD7BQ6GQQ9 843 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 USP17L2Q6R6M4 530 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 V9GY48 417 aaPredicted RBP24.49■■□□□ 1.51
CLN8-213ENST00000637156 STK36Q9NRP7 1315 aa24.49■■□□□ 1.51
CLN8-213ENST00000637156 USP17L5A8MUK1 530 aa24.48■■□□□ 1.51
CLN8-213ENST00000637156 GOLGA8HP0CJ92 632 aa24.48■■□□□ 1.51
CLN8-213ENST00000637156 TRIM22Q8IYM9 498 aa24.48■■□□□ 1.51
CLN8-213ENST00000637156 FBXO18Q8NFZ0 1043 aa24.48■■□□□ 1.51
CLN8-213ENST00000637156 ALG1Q9BT22 464 aa24.48■■□□□ 1.51
CLN8-213ENST00000637156 RNF26Q9BY78 433 aaPredicted RBP24.48■■□□□ 1.51
CLN8-213ENST00000637156 PRPF3O43395 683 aaKnown RBP24.47■■□□□ 1.51
CLN8-213ENST00000637156 PDHBP11177 359 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 CAP2P40123 477 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 GUCY1B3Q02153 619 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 PPP4R3BQ5MIZ7 849 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 FERMT3Q86UX7 667 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 C8orf76Q96K31 380 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 SNHG28P0DPA3 235 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 MCM4P33991 863 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 ICA1Q05084 483 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 PKN1Q16512 942 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 FOXD4L6Q3SYB3 417 aaPredicted RBP24.47■■□□□ 1.51
CLN8-213ENST00000637156 FOXD4L3Q6VB84 417 aaPredicted RBP24.47■■□□□ 1.51
CLN8-213ENST00000637156 MYH8P13535 1937 aa24.47■■□□□ 1.51
CLN8-213ENST00000637156 GREB1LQ9C091 1923 aaPredicted RBP24.47■■□□□ 1.51
CLN8-213ENST00000637156 DEXIO95424 95 aa24.46■■□□□ 1.51
CLN8-213ENST00000637156 SLC35G1Q2M3R5 365 aa24.46■■□□□ 1.51
CLN8-213ENST00000637156 hCG_1642624A0A1W2PR95 340 aa24.45■■□□□ 1.51
CLN8-213ENST00000637156 POTECB2RU33 542 aa24.45■■□□□ 1.51
CLN8-213ENST00000637156 PARP1P09874 1014 aaKnown RBP24.45■■□□□ 1.51
CLN8-213ENST00000637156 GNAQP50148 359 aa24.45■■□□□ 1.51
CLN8-213ENST00000637156 GBP4Q96PP9 640 aa24.45■■□□□ 1.51
CLN8-213ENST00000637156 CNTNAP5Q8WYK1 1306 aa24.45■■□□□ 1.5
CLN8-213ENST00000637156 PITPNM2Q9BZ72 1349 aa24.45■■□□□ 1.5
CLN8-213ENST00000637156 A0A1W2PRG0 241 aa24.45■■□□□ 1.5
CLN8-213ENST00000637156 KLRF2D3W0D1 207 aa24.45■■□□□ 1.5
CLN8-213ENST00000637156 CYTH3O43739 400 aa24.45■■□□□ 1.5
CLN8-213ENST00000637156 ZBTB21Q9ULJ3 1066 aa24.45■■□□□ 1.5
CLN8-213ENST00000637156 EPHX2P34913 555 aa24.44■■□□□ 1.5
CLN8-213ENST00000637156 DLK2Q6UY11 383 aa24.44■■□□□ 1.5
CLN8-213ENST00000637156 USP50Q70EL3 339 aaPredicted RBP24.44■■□□□ 1.5
CLN8-213ENST00000637156 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.44■■□□□ 1.5
CLN8-213ENST00000637156 RGS22Q8NE09 1264 aa24.43■■□□□ 1.5
CLN8-213ENST00000637156 WASF1Q92558 559 aa24.43■■□□□ 1.5
CLN8-213ENST00000637156 CPVLQ9H3G5 476 aa24.43■■□□□ 1.5
CLN8-213ENST00000637156 PPP2R3BQ9Y5P8 575 aa24.43■■□□□ 1.5
CLN8-213ENST00000637156 VEGFAP15692 232 aaPredicted RBP24.43■■□□□ 1.5
CLN8-213ENST00000637156 AKAP17AQ02040 695 aaKnown RBP24.43■■□□□ 1.5
CLN8-213ENST00000637156 NBR1Q14596 966 aa24.43■■□□□ 1.5
CLN8-213ENST00000637156 RESTQ13127 1097 aa24.42■■□□□ 1.5
CLN8-213ENST00000637156 KRT40Q6A162 431 aa24.42■■□□□ 1.5
CLN8-213ENST00000637156 FAM173BQ6P4H8 233 aa24.42■■□□□ 1.5
CLN8-213ENST00000637156 DCPSQ96C86 337 aaKnown RBP24.42■■□□□ 1.5
CLN8-213ENST00000637156 LZTS2Q9BRK4 669 aa24.42■■□□□ 1.5
CLN8-213ENST00000637156 FRMPD2Q68DX3 1309 aaPredicted RBP24.41■■□□□ 1.5
CLN8-213ENST00000637156 F5H6K3 240 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 ECE1P42892 770 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 KLRC3Q07444 240 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 ACER1Q8TDN7 264 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 SHISA4Q96DD7 197 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 UBA5Q9GZZ9 404 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 FZD1Q9UP38 647 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 ATP6V1DQ9Y5K8 247 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 ASNSP08243 561 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 SMARCA1P28370 1054 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 ZNF543Q08ER8 600 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 MCTP1Q6DN14 999 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 PIBF1Q8WXW3 757 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 TAF1DQ9H5J8 278 aaPredicted RBP24.41■■□□□ 1.5
CLN8-213ENST00000637156 ZNF112Q9UJU3 913 aa24.41■■□□□ 1.5
CLN8-213ENST00000637156 CTNND1O60716 968 aaKnown RBP24.4■■□□□ 1.5
CLN8-213ENST00000637156 DCAF15Q66K64 600 aa24.4■■□□□ 1.5
CLN8-213ENST00000637156 SLFN13Q68D06 897 aa24.4■■□□□ 1.5
CLN8-213ENST00000637156 ZC3H15Q8WU90 426 aaKnown RBP24.4■■□□□ 1.5
CLN8-213ENST00000637156 ZSCAN16Q9H4T2 348 aaPredicted RBP24.4■■□□□ 1.5
CLN8-213ENST00000637156 INPP5BP32019 993 aa24.39■■□□□ 1.5
CLN8-213ENST00000637156 DNM1Q05193 864 aaKnown RBP24.39■■□□□ 1.5
CLN8-213ENST00000637156 ASPRV1Q53RT3 343 aa24.39■■□□□ 1.5
CLN8-213ENST00000637156 GMCL1P1Q8NEA9 526 aa24.39■■□□□ 1.5
CLN8-213ENST00000637156 HOOK2Q96ED9 719 aa24.39■■□□□ 1.5
CLN8-213ENST00000637156 SPZ1Q9BXG8 430 aa24.39■■□□□ 1.5
CLN8-213ENST00000637156 TMX2Q9Y320 296 aa24.39■■□□□ 1.5
CLN8-213ENST00000637156 RAD21O60216 631 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 PFKFB3Q16875 520 aaPredicted RBP24.38■■□□□ 1.49
CLN8-213ENST00000637156 SUPT20HL1Q3ZLR7 823 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 TTBK2Q6IQ55 1244 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 KCTD1Q719H9 257 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 CCDC84Q86UT8 332 aaPredicted RBP24.38■■□□□ 1.49
CLN8-213ENST00000637156 SULF1Q8IWU6 871 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 ZNF341Q9BYN7 854 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms