RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CTR9Q6PD62 1173 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 KIFC2Q96AC6 838 aa15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-228ENST00000636610 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 TSPY2A6NKD2 308 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 TROAPQ12815 778 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 SPATA1Q5VX52 437 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 DYNLL2Q96FJ2 89 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 PHF20Q9BVI0 1012 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 RNF26Q9BY78 433 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 MRFAP1Q9Y605 127 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 A0A1B0GTH6 734 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 KCNJ6P48051 423 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 MAP3K9P80192 1104 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 IL17AQ16552 155 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 CTCFLQ8NI51 663 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 MTRQ99707 1265 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 ADGRG1Q9Y653 693 aa15.91■□□□□ 0.14
CACNA1A-228ENST00000636610 XDHP47989 1333 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 PPP1R3GB7ZBB8 358 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 ENC1O14682 589 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 NTSR2O95665 410 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 USP17L8P0C7I0 530 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 CAVIN4Q5BKX8 364 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 APTXQ7Z2E3 356 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 MYH2Q9UKX2 1941 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 PNPLA7Q6ZV29 1317 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 GYPCP04921 128 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 GOLGA8HP0CJ92 632 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 OAS2P29728 719 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 FUT2Q10981 343 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 KRT31Q15323 416 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 NT5DC1Q5TFE4 455 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 SLC35F6Q8N357 371 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 FAM84BQ96KN1 310 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 GPR101Q96P66 508 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 BRMS1Q9HCU9 246 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 ADD3Q9UEY8 706 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 PARP4Q9UKK3 1724 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 DCCP43146 1447 aa15.9■□□□□ 0.14
CACNA1A-228ENST00000636610 PHACTR2O75167 634 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 TBC1D8O95759 1140 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 FILIP1LQ4L180 1135 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 KANK3Q6NY19 840 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 CC2D1AQ6P1N0 951 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 TXNRD3Q86VQ6 643 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 MECOMQ03112 1051 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 NPY5RQ15761 445 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 DDB1Q16531 1140 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 GDAP1L1Q96MZ0 367 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 UIMC1Q96RL1 719 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 CHP1Q99653 195 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 GNL3LQ9NVN8 582 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 MCM9Q9NXL9 1143 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 GUCA1BQ9UMX6 200 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 KIF5CO60282 957 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 ZRANB2O95218 330 aaKnown RBP eCLIP15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 SLC44A5Q8NCS7 719 aa15.89■□□□□ 0.13
CACNA1A-228ENST00000636610 CHMP4BP1P59074 171 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 SKIDA1Q1XH10 827 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 NELFBQ8WX92 580 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 ARFGAP3Q9NP61 516 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 COL4A1P02462 1669 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 TAF1P21675 1872 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 BAZ2AQ9UIF9 1905 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 ERCC5P28715 1186 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 UBXN1Q04323 297 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 PTF1AQ7RTS3 328 aa15.88■□□□□ 0.13
CACNA1A-228ENST00000636610 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 MFAP3LO75121 409 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 ERVK-24P63145 666 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 TMTC3Q6ZXV5 915 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 FAM53CQ9NYF3 392 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 RTL9Q8NET4 1388 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 KRT9P35527 623 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 PMS1P54277 932 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 VAT1LQ9HCJ6 419 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 HDAC6Q9UBN7 1215 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 STX8Q9UNK0 236 aa15.87■□□□□ 0.13
CACNA1A-228ENST00000636610 IQUBQ8NA54 791 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 SPATA20Q8TB22 786 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 GOLGA1Q92805 767 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 PNKPQ96T60 521 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 SAP30BPQ9UHR5 308 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 COL1A1P02452 1464 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 SCG2P13521 617 aa15.86■□□□□ 0.13
CACNA1A-228ENST00000636610 PRCPP42785 496 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms