RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.31
THUMPD1-206ENST00000636554 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.3
THUMPD1-206ENST00000636554 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 ANKRD65E5RJM6 399 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 TNNT3P45378 269 aaPredicted RBP16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 TRIM28Q13263 835 aaKnown RBP16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 RASGRF1Q13972 1273 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 FAM204AQ9H8W3 233 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 MYO6Q9UM54 1294 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 REXO2Q9Y3B8 237 aaKnown RBP16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 ZNF142P52746 1687 aaPredicted RBP16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 SART3Q15020 963 aaKnown RBP16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 HSP90B2PQ58FF3 399 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 TMTC1Q8IUR5 882 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 SPATA5Q8NB90 893 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 FAM71BQ8TC56 605 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 STAG1Q8WVM7 1258 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 GSDMAQ96QA5 445 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 GUCA1BQ9UMX6 200 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 MYH3P11055 1940 aa16.95■□□□□ 0.3
THUMPD1-206ENST00000636554 ERICH2A1L162 156 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 ZNF174Q15697 407 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 CCDC51Q96ER9 411 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 IVLP07476 585 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 KRT9P35527 623 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 CYP26C1Q6V0L0 522 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 MSL3Q8N5Y2 521 aaKnown RBP16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 GDAP1L1Q96MZ0 367 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 MAPK8IP1Q9UQF2 711 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 SLC4A4Q9Y6R1 1079 aa16.94■□□□□ 0.3
THUMPD1-206ENST00000636554 SEMA3EO15041 775 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 PKN1Q16512 942 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 RRAGBQ5VZM2 374 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 LRRC31Q6UY01 552 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 DOCK2Q92608 1830 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 SRGAP2O75044 1071 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 TOM1L2Q6ZVM7 507 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 MTRQ99707 1265 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
THUMPD1-206ENST00000636554 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 IRS4O14654 1257 aaPredicted RBP16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 RNF40O75150 1001 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 KRT2P35908 639 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 MAP3K12Q12852 859 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 CT47A1Q5JQC4 288 aaPredicted RBP16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 RIN2Q8WYP3 895 aaPredicted RBP16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 GBP3Q9H0R5 595 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 LIMA1Q9UHB6 759 aaKnown RBP16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 RPS6KA5O75582 802 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 TNKSO95271 1327 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 PLEKHA8P1O95397 391 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 UQCRFS1P1P0C7P4 283 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 GSPT2Q8IYD1 628 aaKnown RBP16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 UBAC1Q9BSL1 405 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 PHF20Q9BVI0 1012 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
THUMPD1-206ENST00000636554 KCNJ18B7U540 433 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 ZMYND10O75800 440 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 SYF2O95926 243 aaKnown RBP16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 ATP1A1P05023 1023 aaKnown RBP16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 KCNJ12Q14500 433 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 PUM3Q15397 648 aaKnown RBP16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 TCP11X2Q5H9J9 407 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 WDR93Q6P2C0 686 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 GIGYF2Q6Y7W6 1299 aaKnown RBP16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 RNF26Q9BY78 433 aaPredicted RBP16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 MYO1AQ9UBC5 1043 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 NDUFA10O95299 355 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 CAPZA3Q96KX2 299 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 GDAQ9Y2T3 454 aa16.91■□□□□ 0.3
THUMPD1-206ENST00000636554 FGFR2P21802 821 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 PAK1Q13153 545 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 PTGDRQ13258 359 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 E2F4Q16254 413 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 CCDC148Q8NFR7 591 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 NELFBQ8WX92 580 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 LPIN2Q92539 896 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 EPN1Q9Y6I3 576 aaPredicted RBP16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 BCORQ6W2J9 1755 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 TRIM49BA6NDI0 452 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 EIF3CLB5ME19 914 aaKnown RBP16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 NOP2P46087 812 aaKnown RBP16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 TUBB4BP68371 445 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms