RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 IFIT3O14879 490 aaKnown RBP10.04□□□□□ -0.8
CDKL5-209ENST00000635828 PPATQ06203 517 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 APOBRQ0VD83 1088 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 FEZ1Q99689 392 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 CCL15-CCL14A0A0B4J2E2 113 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 USP17L10C9JJH3 530 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 F5H6K3 240 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 ZKSCAN1P17029 563 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-209ENST00000635828 VCAM1P19320 739 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 KLRC3Q07444 240 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 CCL15Q16663 113 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 RLFQ13129 1914 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 NDUFB10O96000 172 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 TRDNQ13061 729 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 FAM83BQ5T0W9 1011 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 BRF1Q92994 677 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 HOOK2Q96ED9 719 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-209ENST00000635828 A0A0G2JLL6 359 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-209ENST00000635828 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 TTLL1O95922 423 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 RPS6KB1P23443 525 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 TMEM67Q5HYA8 995 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 RUFY3Q7L099 469 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 PRRT2Q7Z6L0 340 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-209ENST00000635828 PIBF1Q8WXW3 757 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 PLIN4Q96Q06 1357 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 KRT23Q9C075 422 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 COL11A1P12107 1806 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-209ENST00000635828 SH2B2O14492 632 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-209ENST00000635828 STK3Q13188 491 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 PPIL2Q13356 520 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 RNF20Q5VTR2 975 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 CCDC17Q96LX7 622 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
CDKL5-209ENST00000635828 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 TMX2Q9Y320 296 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
CDKL5-209ENST00000635828 TBC1D8O95759 1140 aa10.02□□□□□ -0.8
CDKL5-209ENST00000635828 NEK4P51957 841 aa10.02□□□□□ -0.8
CDKL5-209ENST00000635828 DHX32Q7L7V1 743 aaKnown RBP10.02□□□□□ -0.8
CDKL5-209ENST00000635828 UBAC1Q9BSL1 405 aa10.02□□□□□ -0.8
CDKL5-209ENST00000635828 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.8
CDKL5-209ENST00000635828 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.8
CDKL5-209ENST00000635828 MCM5P33992 734 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 NOVP48745 357 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
CDKL5-209ENST00000635828 AK2P54819 239 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 IFIT1BQ5T764 474 aaKnown RBP10.02□□□□□ -0.81
CDKL5-209ENST00000635828 BLOC1S2Q6QNY1 142 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 ISY1Q9ULR0 285 aaKnown RBP10.02□□□□□ -0.81
CDKL5-209ENST00000635828 NAP1L2Q9ULW6 460 aaPredicted RBP10.02□□□□□ -0.81
CDKL5-209ENST00000635828 LOC285556D6RIA3 1793 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 PNMA1Q8ND90 353 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 NUP133Q8WUM0 1156 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 WDR18Q9BV38 432 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 RPAP3Q9H6T3 665 aaPredicted RBP10.02□□□□□ -0.81
CDKL5-209ENST00000635828 CNNM2Q9H8M5 875 aa10.02□□□□□ -0.81
CDKL5-209ENST00000635828 TRPA1O75762 1119 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 PDHBP11177 359 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 MICU3Q86XE3 530 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 TTC14Q96N46 770 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 PDHXO00330 501 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 CCT2P78371 535 aaKnown RBP10.01□□□□□ -0.81
CDKL5-209ENST00000635828 WTAPQ15007 396 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 TXNRD2Q9NNW7 524 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 ZBTB48P10074 688 aaPredicted RBP10.01□□□□□ -0.81
CDKL5-209ENST00000635828 CDC27P30260 824 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 TROAPQ12815 778 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 SNAPC2Q13487 334 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 IFNL1Q8IU54 200 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 KIAA1683Q9H0B3 1180 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 VCPKMTQ9H867 229 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 NYAP2Q9P242 653 aa10.01□□□□□ -0.81
CDKL5-209ENST00000635828 PLEKHA8P1O95397 391 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 ST3GAL1Q11201 340 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 SLFN13Q68D06 897 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 NECAB1Q8N987 351 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 P2RX7Q99572 595 aaKnown RBP10□□□□□ -0.81
CDKL5-209ENST00000635828 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 TCP11L1Q9NUJ3 509 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 HPS5Q9UPZ3 1129 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 DOCK3Q8IZD9 2030 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 MKL1Q969V6 931 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 CCDC102AQ96A19 550 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 PDRG1Q9NUG6 133 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
CDKL5-209ENST00000635828 CRHR2Q13324 411 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 Q3C1V9 767 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms