RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
SMARCA2-244ENST00000635659 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 ARHGEF10O15013 1369 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 GJB6O95452 261 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 ITGA6P23229 1130 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 SQSTM1Q13501 440 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 ADAMTSL4Q6UY14 1074 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 C16orf86Q6ZW13 317 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 PDZD3Q86UT5 571 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 JMYQ8N9B5 988 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 TNFRSF25Q93038 417 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 LMO7Q8WWI1 1683 aa9.38□□□□□ -0.91
SMARCA2-244ENST00000635659 USP54Q70EL1 1684 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 MEIS3P2A8K0S8 358 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 CTBSQ01459 385 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 PTPN11Q06124 597 aaPredicted RBP9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 AP3B2Q13367 1082 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 MTERF2Q49AM1 385 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 KRT28Q7Z3Y7 464 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 FAM35AQ86V20 835 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 TRERF1Q96PN7 1200 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 FEZ1Q99689 392 aa9.37□□□□□ -0.91
SMARCA2-244ENST00000635659 CPB1P15086 417 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 GYS2P54840 703 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 PPP2R5EQ16537 467 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 LRRFIP1Q32MZ4 808 aaKnown RBP9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 TM9SF2Q99805 663 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 CACNA2D2Q9NY47 1150 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 SLC6A14Q9UN76 642 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 THSD7AQ9UPZ6 1657 aa9.36□□□□□ -0.91
SMARCA2-244ENST00000635659 CENPJQ9HC77 1338 aaPredicted RBP9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 RXRBP28702 533 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 IKBKEQ14164 716 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 FRRS1LQ9P0K9 344 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 NAGPAQ9UK23 515 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 USP21Q9UK80 565 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 TRIM33Q9UPN9 1127 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 LEMD3Q9Y2U8 911 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 WNK3Q9BYP7 1800 aa9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 ROCK2O75116 1388 aaKnown RBP9.35□□□□□ -0.91
SMARCA2-244ENST00000635659 PPIP5K1Q6PFW1 1433 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 A0A1W2PQH9 124 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 GRIN3BO60391 1043 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 DDAH1O94760 285 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 CABP4P57796 275 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 MAP1SQ66K74 1059 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 ELMSAN1Q6PJG2 1045 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 LACRTQ9GZZ8 138 aa9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 SOX17Q9H6I2 414 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-244ENST00000635659 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 SLIT3O75094 1523 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 B2RBV5 119 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 GUCY2CP25092 1073 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 C6orf15Q6UXA7 325 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 TTC6Q86TZ1 520 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 FAM178BQ8IXR5 827 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 RPUSD2Q8IZ73 545 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 CACTIN-AS1Q8N1I8 211 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 SYNPOQ8N3V7 929 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 LPIN3Q9BQK8 851 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 CDK19Q9BWU1 502 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 KLHL42Q9P2K6 505 aa9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-244ENST00000635659 COL18A1P39060 1754 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 USP6P35125 1406 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 SSH2Q76I76 1423 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 EPHA1P21709 976 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 CDC27P30260 824 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 TCEA2Q15560 299 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 MPRIPQ6WCQ1 1025 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 NOL8Q76FK4 1167 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 TTC9Q92623 222 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 ZMYM5Q9UJ78 669 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 SLC12A7Q9Y666 1083 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 PTCH2Q9Y6C5 1203 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
SMARCA2-244ENST00000635659 H3BRJ5 948 aa9.31□□□□□ -0.92
SMARCA2-244ENST00000635659 SOX1O00570 391 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-244ENST00000635659 C2CD2LO14523 706 aa9.31□□□□□ -0.92
SMARCA2-244ENST00000635659 DIAPH1O60610 1272 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms