RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 KRTAP1-1Q07627 177 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 DUSP4Q13115 394 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 SEPT6Q14141 434 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 RTP5Q14D33 572 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 SNX17Q15036 470 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 SLC14A2Q15849 920 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 HHIPL2Q6UWX4 724 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 TMC7Q7Z402 723 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 DTWD2Q8NBA8 298 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 DNAJB8Q8NHS0 232 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 GAL3ST3Q96A11 431 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 SHISA4Q96DD7 197 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 PWWP2AQ96N64 755 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 CNTD2Q9H8S5 307 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 TJP2Q9UDY2 1190 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 PPM1HQ9ULR3 514 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 CYP8B1Q9UNU6 501 aa2.25□□□□□ -2.05
SMARCB1-209ENST00000635578 NOTOA8MTQ0 251 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 K7ESM1 405 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 OVOL3O00110 214 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 LMNB1P20700 586 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 RPL10P27635 214 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 NCKAP1LP55160 1127 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 ZXDAP98168 799 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 TEKQ02763 1124 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 SCARA3Q6AZY7 606 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 TMC6Q7Z403 805 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 FRMD5Q7Z6J6 570 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 NLRX1Q86UT6 975 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 ANKS4BQ8N8V4 417 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 MZB1Q8WU39 189 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 ALKBH8Q96BT7 664 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 CRELD1Q96HD1 420 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 TMEM87BQ96K49 555 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 GPR62Q9BZJ7 368 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 LUC7LQ9NQ29 371 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 ZMYM5Q9UJ78 669 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 KCNH3Q9ULD8 1083 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 PALD1Q9ULE6 856 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 MYRFQ9Y2G1 1151 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 SNCAIPQ9Y6H5 919 aa2.24□□□□□ -2.05
SMARCB1-209ENST00000635578 SHISA3A0PJX4 238 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 IRS4O14654 1257 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 CILPO75339 1184 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 FSHBP01225 129 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 TNNI2P48788 182 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 PLCB3Q01970 1234 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 ENOX2Q16206 610 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 ZNF827Q17R98 1081 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 CLEC16AQ2KHT3 1053 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 UBXN11Q5T124 520 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 TTBK2Q6IQ55 1244 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 B4GALNT3Q6L9W6 998 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 CEP128Q6ZU80 1094 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 WAPLQ7Z5K2 1190 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 FERMT3Q86UX7 667 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 FAM129CQ86XR2 697 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 IGDCC3Q8IVU1 814 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 MRPL41Q8IXM3 137 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 TMEFF1Q8IYR6 380 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 CCDC82Q8N4S0 544 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 LINC01356Q8N9X3 169 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 LINC01599Q8WXQ3 324 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 SETDB2Q96T68 719 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 G6PC3Q9BUM1 346 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 RBCK1Q9BYM8 510 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 OSBPL7Q9BZF2 842 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 USP40Q9NVE5 1235 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 TTF2Q9UNY4 1162 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 CEP131Q9UPN4 1083 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 PCDHB5Q9Y5E4 795 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 GTF3C3Q9Y5Q9 886 aa2.23□□□□□ -2.05
SMARCB1-209ENST00000635578 NUDT19A8MXV4 375 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 HRKO00198 91 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 GFRA2O00451 464 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 FKTNO75072 461 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 PPP1R15AO75807 674 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 USP17L7P0C7H9 530 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 TNFRSF1AP19438 455 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 MAPK8P45983 427 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 LIMS1P48059 325 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 KCNC1P48547 511 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 SLURP1P55000 103 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 KIR3DS1Q14943 382 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 MAP3K11Q16584 847 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 OLFML2BQ68BL8 750 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 SLC6A19Q695T7 634 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 LSRQ86X29 649 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 ADGRG2Q8IZP9 1017 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 TP53I13Q8NBR0 393 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 SLC16A11Q8NCK7 471 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 CYB5D2Q8WUJ1 264 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 ACSF2Q96CM8 615 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 VWCEQ96DN2 955 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 PLCD4Q9BRC7 762 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 BIN2Q9UBW5 565 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 SRRDQ9UH36 339 aa2.22□□□□□ -2.05
SMARCB1-209ENST00000635578 A0A1B0GTL3 188 aa2.21□□□□□ -2.06
SMARCB1-209ENST00000635578 SSU72P8A0A1W2PR75 194 aa2.21□□□□□ -2.06
SMARCB1-209ENST00000635578 UPK3BL1B0FP48 263 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms