RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 AS3MTQ9HBK9 375 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 THSD7BQ9C0I4 1608 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
LINC00339-208ENST00000634934 RAD21O60216 631 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 ECE1P42892 770 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
LINC00339-208ENST00000634934 DOCK1Q14185 1865 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 NOVP48745 357 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
LINC00339-208ENST00000634934 SPP2Q13103 211 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.29
LINC00339-208ENST00000634934 SYNE3Q6ZMZ3 975 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 CATIPQ7Z7H3 387 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 RASAL3Q86YV0 1011 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 FBXL16Q8N461 479 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 ZNF280CQ8ND82 737 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 IL27Q8NEV9 243 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 SLC12A7Q9Y666 1083 aa16.89■□□□□ 0.29
LINC00339-208ENST00000634934 GREB1LQ9C091 1923 aaPredicted RBP16.88■□□□□ 0.29
LINC00339-208ENST00000634934 ATAD5Q96QE3 1844 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 SPDYE5A6NIY4 337 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
LINC00339-208ENST00000634934 PPATQ06203 517 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 RAB11FIP4Q86YS3 637 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 MKL1Q969V6 931 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 OPTNQ96CV9 577 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 MYL10Q9BUA6 226 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 WDR18Q9BV38 432 aa16.88■□□□□ 0.29
LINC00339-208ENST00000634934 SLC10A3P09131 477 aa16.87■□□□□ 0.29
LINC00339-208ENST00000634934 MTMR2Q13614 643 aa16.87■□□□□ 0.29
LINC00339-208ENST00000634934 ZNF654Q8IZM8 581 aa16.87■□□□□ 0.29
LINC00339-208ENST00000634934 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
LINC00339-208ENST00000634934 CIZ1Q9ULV3 898 aaPredicted RBP16.87■□□□□ 0.29
LINC00339-208ENST00000634934 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
LINC00339-208ENST00000634934 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
LINC00339-208ENST00000634934 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 ZBTB43O43298 467 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 APOA5Q6Q788 366 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 F5H6K3 240 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 IRF6O14896 467 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 RXRAP19793 462 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 MCM2P49736 904 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 KLRC3Q07444 240 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 STK3Q13188 491 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 PPIL2Q13356 520 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 SLFN13Q68D06 897 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 JMYQ8N9B5 988 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
LINC00339-208ENST00000634934 ISY1Q9ULR0 285 aaKnown RBP16.86■□□□□ 0.29
LINC00339-208ENST00000634934 DDAH1O94760 285 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 NDUFB10O96000 172 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 PDIA3P30101 505 aaKnown RBP16.85■□□□□ 0.29
LINC00339-208ENST00000634934 DDIT3P35638 169 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 BACE1P56817 501 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 EVCP57679 992 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 WNK4Q96J92 1243 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 VCPKMTQ9H867 229 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 SYNPO2Q9UMS6 1093 aa16.85■□□□□ 0.29
LINC00339-208ENST00000634934 GOLGA8AA7E2F4 631 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 CALM1P0DP23 149 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 CALM2P0DP24 149 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 CALM3P0DP25 149 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 GJA5P36382 358 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00339-208ENST00000634934 USP14P54578 494 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 HMGCS2P54868 508 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 CCT2P78371 535 aaKnown RBP16.84■□□□□ 0.29
LINC00339-208ENST00000634934 TROAPQ12815 778 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 DGKZQ13574 1117 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 USP17L2Q6R6M4 530 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 RASGRP2Q7LDG7 609 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 GMCL1P1Q8NEA9 526 aa16.84■□□□□ 0.29
LINC00339-208ENST00000634934 ZNF274Q96GC6 653 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-208ENST00000634934 C19orf81C9J6K1 198 aa16.83■□□□□ 0.28
LINC00339-208ENST00000634934 CXCL11O14625 94 aa16.83■□□□□ 0.28
LINC00339-208ENST00000634934 LARGE1O95461 756 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms