RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-219ENST00000629151 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 TRIM75PA6NK02 468 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 F5H6K3 240 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-219ENST00000629151 NMT2O60551 498 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 MAP2K2P36507 400 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 MCM2P49736 904 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 KLRC3Q07444 240 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 SREBF2Q12772 1141 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 OTUD7BQ6GQQ9 843 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 NFXL1Q6ZNB6 911 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-219ENST00000629151 RASAL3Q86YV0 1011 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 ZKSCAN3Q9BRR0 538 aa13.52□□□□□ -0.25
PTPN7-219ENST00000629151 A0A1W2PRG0 241 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 TESPA1A2RU30 521 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-219ENST00000629151 EVCP57679 992 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 MTMR2Q13614 643 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 Q6ZUG5 572 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-219ENST00000629151 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 ACER1Q8TDN7 264 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 KIF2CQ99661 725 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
PTPN7-219ENST00000629151 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 ZCCHC17Q9NP64 241 aaKnown RBP13.51□□□□□ -0.25
PTPN7-219ENST00000629151 SLC45A1Q9Y2W3 748 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 SLC12A7Q9Y666 1083 aa13.51□□□□□ -0.25
PTPN7-219ENST00000629151 LAMB1P07942 1786 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 CCDC196A0A1B0GTZ2 297 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-219ENST00000629151 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
PTPN7-219ENST00000629151 DDAH1O94760 285 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 KIF5BP33176 963 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 GNAQP50148 359 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-219ENST00000629151 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
PTPN7-219ENST00000629151 SLFN13Q68D06 897 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 DCAF4Q8WV16 495 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-219ENST00000629151 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
PTPN7-219ENST00000629151 LAMA4Q16363 1823 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 PLA2G6O60733 806 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 ALDH1A1P00352 501 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 HOXA7P31268 230 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-219ENST00000629151 GJA5P36382 358 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 SLC1A4P43007 532 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 TM4SF4P48230 202 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 HMGCS2P54868 508 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 ANKRD23Q86SG2 305 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
PTPN7-219ENST00000629151 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 BRF1Q92994 677 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 LZTS2Q9BRK4 669 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-219ENST00000629151 AGTPBP1Q9UPW5 1226 aa13.49□□□□□ -0.25
PTPN7-219ENST00000629151 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 NDUFB10O96000 172 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 SNHG28P0DPA3 235 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 FDX1P10109 184 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 BMP3P12645 472 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 OSBPP22059 807 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 TROAPQ12815 778 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 CCL15Q16663 113 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 ZNF654Q8IZM8 581 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 GTF3C2Q8WUA4 911 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 CHURC1Q8WUH1 139 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 HOXC10Q9NYD6 342 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-219ENST00000629151 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 TRPM7Q96QT4 1865 aa13.48□□□□□ -0.25
PTPN7-219ENST00000629151 MYPNQ86TC9 1320 aa13.47□□□□□ -0.25
PTPN7-219ENST00000629151 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms