RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SP3Q02447 781 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
CHD2-216ENST00000629104 KIAA1755Q5JYT7 1200 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 COL13A1Q5TAT6 717 aaPredicted RBP10.5□□□□□ -0.73
CHD2-216ENST00000629104 CASC1Q6TDU7 716 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
CHD2-216ENST00000629104 LPAR1Q92633 364 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 ASCC2Q9H1I8 757 aaPredicted RBP10.5□□□□□ -0.73
CHD2-216ENST00000629104 VCPKMTQ9H867 229 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 TOMM22Q9NS69 142 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 MTMR4Q9NYA4 1195 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 CPA4Q9UI42 421 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 NEDD4P46934 1319 aa10.5□□□□□ -0.73
CHD2-216ENST00000629104 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 TTLL1O95922 423 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 BCRP11274 1271 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 NT5C2P49902 561 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
CHD2-216ENST00000629104 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 CATSPERGQ6ZRH7 1159 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 NKX2-3Q8TAU0 364 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 MKL1Q969V6 931 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 LSG1Q9H089 658 aaKnown RBP10.49□□□□□ -0.73
CHD2-216ENST00000629104 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
CHD2-216ENST00000629104 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 IL17RBQ9NRM6 502 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 CLIP2Q9UDT6 1046 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 SYNPO2Q9UMS6 1093 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 A0A0G2JMZ2 1700 aa10.49□□□□□ -0.73
CHD2-216ENST00000629104 WDR46O15213 610 aaKnown RBP10.48□□□□□ -0.73
CHD2-216ENST00000629104 NMT2O60551 498 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 CYP21A2P08686 494 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 GCLCP48506 637 aaPredicted RBP10.48□□□□□ -0.73
CHD2-216ENST00000629104 NOVP48745 357 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 HERVK_113P62684 666 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 SPICE1Q8N0Z3 855 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 LRRC47Q8N1G4 583 aaKnown RBP10.48□□□□□ -0.73
CHD2-216ENST00000629104 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 ESR2Q92731 530 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 P2RX7Q99572 595 aaKnown RBP10.48□□□□□ -0.73
CHD2-216ENST00000629104 ANO2Q9NQ90 1003 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 TCP11L1Q9NUJ3 509 aa10.48□□□□□ -0.73
CHD2-216ENST00000629104 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
CHD2-216ENST00000629104 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
CHD2-216ENST00000629104 B4E1Z4 1266 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 F5H6K3 240 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 KDM4AO75164 1064 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 LACTBP83111 547 aaPredicted RBP10.47□□□□□ -0.73
CHD2-216ENST00000629104 CAP1Q01518 475 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 KLRC3Q07444 240 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 FAM110CQ1W6H9 321 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 CTU1Q7Z7A3 348 aaKnown RBP10.47□□□□□ -0.73
CHD2-216ENST00000629104 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 GMCL1P1Q8NEA9 526 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 KRT23Q9C075 422 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 CNNM2Q9H8M5 875 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 STX8Q9UNK0 236 aa10.47□□□□□ -0.73
CHD2-216ENST00000629104 SPDYE16A6NNV3 312 aaPredicted RBP10.46□□□□□ -0.73
CHD2-216ENST00000629104 RAD21O60216 631 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 NDUFB10O96000 172 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 COG2Q14746 738 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 KIF22Q14807 665 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 FAM83BQ5T0W9 1011 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 GTF3C2Q8WUA4 911 aaPredicted RBP10.46□□□□□ -0.73
CHD2-216ENST00000629104 ARHGAP39Q9C0H5 1083 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 MORF4L1Q9UBU8 362 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 TAF6LQ9Y6J9 622 aa10.46□□□□□ -0.73
CHD2-216ENST00000629104 DOCK3Q8IZD9 2030 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 MYPNQ86TC9 1320 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 E7EWF7 191 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 SLC27A2O14975 620 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 FLOT1O75955 427 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 TOP1P11387 765 aaKnown RBP10.45□□□□□ -0.74
CHD2-216ENST00000629104 CTGFP29279 349 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 TRDNQ13061 729 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 NECTIN1Q15223 517 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 CREB3L3Q68CJ9 461 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 SLFN13Q68D06 897 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 RCSD1Q6JBY9 416 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 STOX1Q6ZVD7 989 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 OTOP1Q7RTM1 612 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 TTC14Q96N46 770 aa10.45□□□□□ -0.74
CHD2-216ENST00000629104 NUP88Q99567 741 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms