RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 GPN3Q9UHW5 284 aaPredicted RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 GPR160Q9UJ42 338 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CCDC9Q9Y3X0 531 aaKnown RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 A0A1B0GTL3 188 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 GOLGA6L6A8MZA4 724 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 IRS4O14654 1257 aaPredicted RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 CLSTN1O94985 981 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 C6P13671 934 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 ATP2B4P23634 1241 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 HMGN5P82970 282 aaKnown RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 CCDC173Q0VFZ6 552 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 ORC1Q13415 861 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 ZNF827Q17R98 1081 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 ZBTB37Q5TC79 503 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 RASIP1Q5U651 963 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 CTR9Q6PD62 1173 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 FRMD5Q7Z6J6 570 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 THAP5Q7Z6K1 395 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 DHX37Q8IY37 1157 aaKnown RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 XAGE3Q8WTP9 111 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 CCDC94Q9BW85 323 aaPredicted RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 BACH2Q9BYV9 841 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 MRS2Q9HD23 443 aa2.56□□□□□ -2
SPTAN1-216ENST00000629047 LUC7LQ9NQ29 371 aaKnown RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 DHX57Q6P158 1386 aaKnown RBP2.56□□□□□ -2
SPTAN1-216ENST00000629047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 TMEM238LA0A1B0GVL6 79 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 NOTOA8MTQ0 251 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 PATL2C9JE40 543 aaKnown RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 FFAR3O14843 346 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 OFD1O75665 1012 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 PPP1R15AO75807 674 aaPredicted RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 MCCP23508 829 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 VIPR1P32241 457 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 MCM5P33992 734 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 MAGEA10P43363 369 aaPredicted RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 FAM193AP78312 1265 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 RING1Q06587 406 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 GOLGA3Q08378 1498 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 HNRNPA0Q13151 305 aaKnown RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 ELOAQ14241 798 aaKnown RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 SLBPQ14493 270 aaKnown RBP eCLIP2.55□□□□□ -2
SPTAN1-216ENST00000629047 ADGRF1Q5T601 910 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 SMG6Q86US8 1419 aaKnown RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 ZSCAN30Q86W11 494 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 FAM129CQ86XR2 697 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 PDCL2Q8N4E4 241 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 PDZD8Q8NEN9 1154 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 GTF3C2Q8WUA4 911 aaPredicted RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 ACSBG1Q96GR2 724 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 TONSLQ96HA7 1378 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 Q96M66 194 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 GBP4Q96PP9 640 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 PLCD4Q9BRC7 762 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 SLITRK6Q9H5Y7 841 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 RRAGDQ9NQL2 400 aaPredicted RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 PICK1Q9NRD5 415 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 CALCOCO1Q9P1Z2 691 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 PRDM4Q9UKN5 801 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 ZHX1Q9UKY1 873 aaPredicted RBP2.55□□□□□ -2
SPTAN1-216ENST00000629047 CEP164Q9UPV0 1460 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 NUDCQ9Y266 331 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 KIF3AQ9Y496 699 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 DUSP10Q9Y6W6 482 aa2.55□□□□□ -2
SPTAN1-216ENST00000629047 RB1CC1Q8TDY2 1594 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 UQCRHLA0A096LP55 91 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 FRAT2O75474 233 aaPredicted RBP2.54□□□□□ -2
SPTAN1-216ENST00000629047 LRIG2O94898 1065 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 UQCRHP07919 91 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 TPP2P29144 1249 aaPredicted RBP2.54□□□□□ -2
SPTAN1-216ENST00000629047 NCKAP1LP55160 1127 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 EGR3Q06889 387 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 ZNF252P-AS1Q0IIN9 211 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 RALBP1Q15311 655 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 GAB4Q2WGN9 574 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 HS1BP3Q53T59 392 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 PRPF40BQ6NWY9 871 aaKnown RBP2.54□□□□□ -2
SPTAN1-216ENST00000629047 CNKSR3Q6P9H4 555 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 SASS6Q6UVJ0 657 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 CDH24Q86UP0 819 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 CREBRFQ8IUR6 639 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 IGDCC3Q8IVU1 814 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 FAM9BQ8IZU0 186 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 TIGD1Q96MW7 591 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 GRPEL1Q9HAV7 217 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 RBM28Q9NW13 759 aaKnown RBP2.54□□□□□ -2
SPTAN1-216ENST00000629047 CACNA2D2Q9NY47 1150 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 ING1Q9UK53 422 aaPredicted RBP2.54□□□□□ -2
SPTAN1-216ENST00000629047 HDAC5Q9UQL6 1122 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 PCDHA11Q9Y5I1 949 aa2.54□□□□□ -2
SPTAN1-216ENST00000629047 NACADO15069 1562 aa2.53□□□□□ -2
SPTAN1-216ENST00000629047 CLIP1P30622 1438 aa2.53□□□□□ -2
SPTAN1-216ENST00000629047 RSF1Q96T23 1441 aaPredicted RBP2.53□□□□□ -2
SPTAN1-216ENST00000629047 KTN1Q86UP2 1357 aaKnown RBP2.53□□□□□ -2
SPTAN1-216ENST00000629047 NINLQ9Y2I6 1382 aa2.53□□□□□ -2
SPTAN1-216ENST00000629047 PRAMEF27A3QJZ7 478 aa2.53□□□□□ -2
SPTAN1-216ENST00000629047 N4BP3O15049 544 aa2.53□□□□□ -2
SPTAN1-216ENST00000629047 ARNTP27540 789 aa2.53□□□□□ -2
SPTAN1-216ENST00000629047 SSR1P43307 286 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms