RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 LTKP29376 864 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 SEPT6Q14141 434 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 GGNQ86UU5 652 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 ANKS4BQ8N8V4 417 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 PANK1Q8TE04 598 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 ACSF2Q96CM8 615 aaPredicted RBP5.79□□□□□ -1.48
VPS8-228ENST00000628962 BIN2Q9UBW5 565 aaPredicted RBP5.79□□□□□ -1.48
VPS8-228ENST00000628962 GPR160Q9UJ42 338 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 KCNH3Q9ULD8 1083 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 WWC3Q9ULE0 1092 aa5.79□□□□□ -1.48
VPS8-228ENST00000628962 SASH1O94885 1247 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 PI3P19957 117 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 PRRT2Q7Z6L0 340 aaPredicted RBP5.78□□□□□ -1.48
VPS8-228ENST00000628962 LINC01599Q8WXQ3 324 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 DACT3Q96B18 629 aaPredicted RBP5.78□□□□□ -1.48
VPS8-228ENST00000628962 SIGLEC10Q96LC7 697 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 MBD1Q9UIS9 605 aaPredicted RBP5.78□□□□□ -1.48
VPS8-228ENST00000628962 ADAM30Q9UKF2 790 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 TTF2Q9UNY4 1162 aaKnown RBP5.78□□□□□ -1.48
VPS8-228ENST00000628962 SPG7Q9UQ90 795 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 ZNF281Q9Y2X9 895 aa5.78□□□□□ -1.48
VPS8-228ENST00000628962 NOTOA8MTQ0 251 aa5.77□□□□□ -1.49
VPS8-228ENST00000628962 GALK1P51570 392 aa5.77□□□□□ -1.49
VPS8-228ENST00000628962 TEKQ02763 1124 aa5.77□□□□□ -1.49
VPS8-228ENST00000628962 DUSP4Q13115 394 aa5.77□□□□□ -1.49
VPS8-228ENST00000628962 SYTL4Q96C24 671 aaPredicted RBP5.77□□□□□ -1.49
VPS8-228ENST00000628962 OR14I1A6ND48 311 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 HRKO00198 91 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 EFEMP2O95967 443 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 CELA3BP08861 270 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 PDE4BQ07343 736 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 AGMOQ6ZNB7 445 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 NLRX1Q86UT6 975 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 CYB5D2Q8WUJ1 264 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 RNF141Q8WVD5 230 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 G6PC3Q9BUM1 346 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 IRAK3Q9Y616 596 aa5.76□□□□□ -1.49
VPS8-228ENST00000628962 RBM47A0AV96 593 aaKnown RBP5.75□□□□□ -1.49
VPS8-228ENST00000628962 SLC22A31A6NKX4 558 aa5.75□□□□□ -1.49
VPS8-228ENST00000628962 LRRN2O75325 713 aa5.75□□□□□ -1.49
VPS8-228ENST00000628962 AFF3P51826 1226 aaKnown RBP5.75□□□□□ -1.49
VPS8-228ENST00000628962 EPB41L4AQ9HCS5 686 aaPredicted RBP5.75□□□□□ -1.49
VPS8-228ENST00000628962 PODXL2Q9NZ53 605 aa5.75□□□□□ -1.49
VPS8-228ENST00000628962 GNEQ9Y223 722 aaKnown RBP5.75□□□□□ -1.49
VPS8-228ENST00000628962 ADRB1P08588 477 aa5.74□□□□□ -1.49
VPS8-228ENST00000628962 LMNB1P20700 586 aa5.74□□□□□ -1.49
VPS8-228ENST00000628962 EPHB3P54753 998 aa5.74□□□□□ -1.49
VPS8-228ENST00000628962 SRSF3P84103 164 aaKnown RBP5.74□□□□□ -1.49
VPS8-228ENST00000628962 ADGRF1Q5T601 910 aa5.74□□□□□ -1.49
VPS8-228ENST00000628962 FEZF2Q8TBJ5 459 aa5.74□□□□□ -1.49
VPS8-228ENST00000628962 SHISA3A0PJX4 238 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 UPK3BL1B0FP48 263 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 UPK3BL2E5RIL1 263 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 N4BP3O15049 544 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 ATP2B2Q01814 1243 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 RPL6Q02878 288 aaKnown RBP5.73□□□□□ -1.49
VPS8-228ENST00000628962 CCDC85BQ15834 202 aaPredicted RBP5.73□□□□□ -1.49
VPS8-228ENST00000628962 SIRT2Q8IXJ6 389 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 BORCS6Q96GS4 357 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 CNTD2Q9H8S5 307 aa5.73□□□□□ -1.49
VPS8-228ENST00000628962 IRS4O14654 1257 aaPredicted RBP5.72□□□□□ -1.49
VPS8-228ENST00000628962 LIG3P49916 1009 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 PDE4CQ08493 712 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 TSNAXIP1Q2TAA8 658 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 RETREG2Q8NC44 543 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 ASB16Q96NS5 453 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 ARID3AQ99856 593 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 CRTAC1Q9NQ79 661 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 SIRT5Q9NXA8 310 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 CORINQ9Y5Q5 1042 aa5.72□□□□□ -1.49
VPS8-228ENST00000628962 NRDCO43847 1150 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 TFE3P19532 575 aaPredicted RBP5.71□□□□□ -1.5
VPS8-228ENST00000628962 VIPR1P32241 457 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 TMEM201Q5SNT2 666 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 ERICH6BQ5W0A0 696 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 ZSCAN29Q8IWY8 852 aaPredicted RBP5.71□□□□□ -1.5
VPS8-228ENST00000628962 SP8Q8IXZ3 490 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 SLFN12Q8IYM2 578 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 TMEFF1Q8IYR6 380 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 ZDHHC14Q8IZN3 488 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 FAM13CQ8NE31 585 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 TEPSINQ96N21 525 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 FRMD6Q96NE9 622 aa5.71□□□□□ -1.5
VPS8-228ENST00000628962 USP2O75604 605 aaPredicted RBP5.7□□□□□ -1.5
VPS8-228ENST00000628962 PLCG1P19174 1290 aa5.7□□□□□ -1.5
VPS8-228ENST00000628962 YBX1P67809 324 aaKnown RBP5.7□□□□□ -1.5
VPS8-228ENST00000628962 EFEMP1Q12805 493 aa5.7□□□□□ -1.5
VPS8-228ENST00000628962 VMACQ2NL98 169 aa5.7□□□□□ -1.5
VPS8-228ENST00000628962 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
VPS8-228ENST00000628962 ASPNQ9BXN1 380 aa5.7□□□□□ -1.5
VPS8-228ENST00000628962 TMPRSS5Q9H3S3 457 aa5.7□□□□□ -1.5
VPS8-228ENST00000628962 LUC7LQ9NQ29 371 aaKnown RBP5.7□□□□□ -1.5
VPS8-228ENST00000628962 EIF4BP23588 611 aaKnown RBP5.69□□□□□ -1.5
VPS8-228ENST00000628962 KIR2DL1P43626 348 aaPredicted RBP5.69□□□□□ -1.5
VPS8-228ENST00000628962 KIR2DL2P43627 348 aaPredicted RBP5.69□□□□□ -1.5
VPS8-228ENST00000628962 YARSP54577 528 aaKnown RBP5.69□□□□□ -1.5
VPS8-228ENST00000628962 RNF111Q6ZNA4 994 aa5.69□□□□□ -1.5
VPS8-228ENST00000628962 FAM129CQ86XR2 697 aa5.69□□□□□ -1.5
VPS8-228ENST00000628962 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms