RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 PICK1Q9NRD5 415 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 ORC3Q9UBD5 711 aaPredicted RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 SEC63Q9UGP8 760 aaKnown RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 PCDHAC2Q9Y5I4 1007 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 CNTNAP1P78357 1384 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 LARGE1O95461 756 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 AKR1B1P15121 316 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 CAP2P40123 477 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 TROAPQ12815 778 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 GRM4Q14833 912 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 CDC37L1Q7L3B6 337 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 ZFPM1Q8IX07 1006 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 C8orf76Q96K31 380 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
FOXCUT-201ENST00000628509 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 VPS37CA5D8V6 355 aaPredicted RBP11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 SYT1P21579 422 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 DDIT3P35638 169 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 IREB2P48200 963 aaKnown RBP11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 USP14P54578 494 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 GMCL1P1Q8NEA9 526 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 CCDC148Q8NFR7 591 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 RRP36Q96EU6 259 aaKnown RBP11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 SLC26A6Q9BXS9 759 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
FOXCUT-201ENST00000628509 WDR90Q96KV7 1748 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 NMT2O60551 498 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 GH2P01242 217 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 CALML3P27482 149 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 SLC1A4P43007 532 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 TMTC3Q6ZXV5 915 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 KRT26Q7Z3Y9 468 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 TEX2Q8IWB9 1127 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 TRPM4Q8TD43 1214 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 LPAR1Q92633 364 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 FEZ1Q99689 392 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 ANP32EQ9BTT0 268 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 SPZ1Q9BXG8 430 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 ZBTB21Q9ULJ3 1066 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 ISY1Q9ULR0 285 aaKnown RBP11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 CSADQ9Y600 493 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
FOXCUT-201ENST00000628509 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 KLRF2D3W0D1 207 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 BRD1O95696 1058 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 ARMC9Q7Z3E5 817 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 SCYL3Q8IZE3 742 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 GMCL1Q96IK5 515 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 DNAJC18Q9H819 358 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 SH3GLB2Q9NR46 395 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 PGAP2Q9UHJ9 254 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 MYH4Q9Y623 1939 aa11.73□□□□□ -0.53
FOXCUT-201ENST00000628509 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 SHTN1A0MZ66 631 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 RAD21O60216 631 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 GDF11O95390 407 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 F13A1P00488 732 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 FDX1P10109 184 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 PDHBP11177 359 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 IKQ13123 557 aaPredicted RBP11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 SEPT2Q15019 361 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 SLFN13Q68D06 897 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 MCTP2Q6DN12 878 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 FAM160B2Q86V87 743 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 TEPSINQ96N21 525 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms